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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_12_1 | GO:0071013 | catalytic step 2 spliceosome | 7/127 | 91/19960 | 1.85740647440244e-06 | 0.00010715427536244 | 9.40562129017142e-05 | BUD31/FRG1/HNRNPA3/LSM2/SF3B2/SNRPA1/SNRPD2 | 7 |
| GO | B_12_1 | GO:0098798 | mitochondrial protein-containing complex | 9/127 | 178/19960 | 2.09422036538973e-06 | 0.00010715427536244 | 9.40562129017142e-05 | FXN/GRPEL1/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 | 9 |
| GO | B_12_1 | GO:0032543 | mitochondrial translation | 8/124 | 131/18986 | 2.3326188604084e-06 | 0.00149195525050141 | 0.00140786346832257 | MALSU1/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 | 8 |
| GO | B_12_1 | GO:0000375 | RNA splicing, via transesterification reactions | 12/124 | 342/18986 | 2.51877644991796e-06 | 0.00149195525050141 | 0.00140786346832257 | BUD31/FRG1/HNRNPA3/KHSRP/LSM2/PRPF38A/RBM17/RBM3/SF3B2/SNRNP27/SNRPA1/SNRPD2 | 12 |
| MeSH_gene2pubmed | B_12_1 | D013762 | Tetrahydrofolate Dehydrogenase | 8/128 | 178/26076 | 2.86826217805068e-06 | 0.00078418287947905 | 0.00072431168054142 | CKS2/FXN/GSTO1/PGD/PSME1/QDPR/SMARCA4/TFDP1 | 8 |
| reactome | B_12_1 | R-HSA-5368287 | Mitochondrial translation | 8/107 | 93/11146 | 2.8721231744318e-06 | 0.00041818113419727 | 0.00031200327536985 | KGD4/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 | 8 |
| GO | B_12_1 | GO:0008380 | RNA splicing | 14/124 | 484/18986 | 3.40886824615287e-06 | 0.00151438971835341 | 0.00142903345161093 | BUD31/FRG1/HNRNPA3/KHSRP/LSM2/PRPF38A/RBM17/RBM3/RTRAF/SF3B2/SNRNP27/SNRPA1/SNRPD2/THOC6 | 14 |
| MeSH_gene2pubmed | B_12_1 | D015683 | Gene Products, gag | 10/128 | 316/26076 | 3.80697777899718e-06 | 0.0009462070225253 | 0.00087396552074777 | ABCE1/CHMP4B/IPO5/ITGAE/NUTF2/PPIA/PPP2CA/PSMB8/PTPA/UBB | 10 |
| reactome | B_12_1 | R-HSA-72766 | Translation | 13/107 | 292/11146 | 4.18683465670636e-06 | 0.0005080026050137 | 0.00037901871629131 | APEH/EIF4H/ETF1/FARSB/KGD4/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35/NARS1 | 13 |
| MeSH_gene2pubmed | B_12_1 | D017414 | Ribonucleoprotein, U4-U6 Small Nuclear | 6/128 | 89/26076 | 5.17742398790723e-06 | 0.00114007071823829 | 0.00105302801103209 | LSM2/PHAX/SMARCA4/SNRNP27/SNRPA1/SNRPD2 | 6 |