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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_12_1 | R-HSA-351202 | Metabolism of polyamines | 4/107 | 59/11146 | 0.00243602178589628 | 0.0175586520805197 | 0.0131004402451535 | PSMA6/PSMB8/PSME1/PSME3 | 4 |
| reactome | B_12_1 | R-HSA-202424 | Downstream TCR signaling | 5/107 | 98/11146 | 0.00248529740988197 | 0.0176771056043316 | 0.0131888179465516 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| reactome | B_12_1 | R-HSA-8951664 | Neddylation | 8/107 | 246/11146 | 0.00250101906215131 | 0.0176771056043316 | 0.0131888179465516 | COPS5/DCAF13/PSMA6/PSMB8/PSME1/PSME3/UBB/UBE2D3 | 8 |
| reactome | B_12_1 | R-HSA-162588 | Budding and maturation of HIV virion | 3/107 | 29/11146 | 0.00262115184456022 | 0.0183480629119215 | 0.0136894165161242 | CHMP4B/PPIA/UBB | 3 |
| reactome | B_12_1 | R-HSA-6790901 | rRNA modification in the nucleus and cytosol | 4/107 | 61/11146 | 0.00275259695174472 | 0.0190846721987634 | 0.0142389977654163 | BMS1/DCAF13/GAR1/RRP36 | 4 |
| reactome | B_12_1 | R-HSA-3858494 | Beta-catenin independent WNT signaling | 6/107 | 146/11146 | 0.00278449546017487 | 0.0191237046698802 | 0.0142681197363479 | CLTB/PSMA6/PSMB8/PSME1/PSME3/UBB | 6 |
| reactome | B_12_1 | R-HSA-5607764 | CLEC7A (Dectin-1) signaling | 5/107 | 101/11146 | 0.00283391864415539 | 0.019281240868646 | 0.0143856568655601 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| reactome | B_12_1 | R-HSA-499943 | Interconversion of nucleotide di- and triphosphates | 3/107 | 30/11146 | 0.00289222152828459 | 0.0194957154869554 | 0.0145456755223669 | AK2/DCTD/NME2 | 3 |
| GO | B_12_1 | GO:0046540 | U4/U6 x U5 tri-snRNP complex | 3/127 | 45/19960 | 0.00293722034240202 | 0.0367475172337778 | 0.0322556640214199 | LSM2/SNRNP27/SNRPD2 | 3 |
| reactome | B_12_1 | R-HSA-5668541 | TNFR2 non-canonical NF-kB pathway | 5/107 | 102/11146 | 0.00295761810581628 | 0.0197536328535252 | 0.014738106640282 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |