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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_12_1 | R-HSA-176408 | Regulation of APC/C activators between G1/S and early anaphase | 5/107 | 80/11146 | 0.00100794676431105 | 0.00894860054168835 | 0.006676515152561 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| GO | B_12_1 | GO:0042776 | proton motive force-driven mitochondrial ATP synthesis | 4/124 | 68/18986 | 0.00102223599052094 | 0.046577265516813 | 0.0439520089851513 | ATP5PB/ATP5PO/NDUFS1/SDHC | 4 |
| MeSH_gene2pubmed | B_12_1 | D034481 | Heterogeneous-Nuclear Ribonucleoprotein Group A-B | 5/128 | 156/26076 | 0.0010527638457654 | 0.0464234895858484 | 0.0428791250592732 | HNRNPA3/KHSRP/NUTF2/PPIA/RBM3 | 5 |
| GO | B_12_1 | GO:0046390 | ribose phosphate biosynthetic process | 6/124 | 178/18986 | 0.00111824735712708 | 0.0482326038553047 | 0.0455140467028999 | AK2/ATP5PB/ATP5PO/NDUFS1/NME2/SDHC | 6 |
| GO | B_12_1 | GO:0072524 | pyridine-containing compound metabolic process | 6/124 | 178/18986 | 0.00111824735712708 | 0.0482326038553047 | 0.0455140467028999 | DCXR/MDH1/ME2/MLST8/PGD/PPP2CA | 6 |
| reactome | B_12_1 | R-HSA-2871837 | FCERI mediated NF-kB activation | 5/107 | 82/11146 | 0.00112683408591687 | 0.00976589541127951 | 0.00728629559314665 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| reactome | B_12_1 | R-HSA-9013694 | Signaling by NOTCH4 | 5/107 | 82/11146 | 0.00112683408591687 | 0.00976589541127951 | 0.00728629559314665 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| GO | B_12_1 | GO:0042254 | ribosome biogenesis | 8/124 | 317/18986 | 0.00113999401346246 | 0.0482326038553047 | 0.0455140467028999 | BMS1/DCAF13/EXOSC5/FRG1/GAR1/GTF3A/MALSU1/RRP36 | 8 |
| GO | B_12_1 | GO:0043021 | ribonucleoprotein complex binding | 6/126 | 174/18737 | 0.00115569795445631 | 0.0305296876302207 | 0.0273717936581757 | ABCE1/ABCF1/ETF1/MALSU1/OLA1/RBM3 | 6 |
| reactome | B_12_1 | R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) | 4/107 | 49/11146 | 0.00122030109274471 | 0.0104515199472723 | 0.00779783732329746 | PSMA6/PSMB8/PSME1/PSME3 | 4 |