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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_12_1 | R-HSA-69242 | S Phase | 7/107 | 162/11146 | 0.00092951457762377 | 0.00856565332291279 | 0.00639079976087767 | PSMA6/PSMB8/PSME1/PSME3/RBBP4/TFDP1/UBB | 7 |
| GO | B_12_1 | GO:0019362 | pyridine nucleotide metabolic process | 6/124 | 172/18986 | 0.00093675313509685 | 0.0449894681369488 | 0.04245370538291 | DCXR/MDH1/ME2/MLST8/PGD/PPP2CA | 6 |
| GO | B_12_1 | GO:0046496 | nicotinamide nucleotide metabolic process | 6/124 | 172/18986 | 0.00093675313509685 | 0.0449894681369488 | 0.04245370538291 | DCXR/MDH1/ME2/MLST8/PGD/PPP2CA | 6 |
| MeSH_gene2pubmed | B_12_1 | D015488 | HIV Antigens | 5/128 | 153/26076 | 0.00096532462354658 | 0.0447321613690908 | 0.0413169272415389 | IPO5/ITGAE/NUTF2/PPIA/PSMB8 | 5 |
| GO | B_12_1 | GO:0009201 | ribonucleoside triphosphate biosynthetic process | 5/124 | 116/18986 | 0.00098612767871024 | 0.0461144443438976 | 0.0435152740217569 | ATP5PB/ATP5PO/NDUFS1/NME2/SDHC | 5 |
| GO | B_12_1 | GO:0120114 | Sm-like protein family complex | 5/127 | 119/19960 | 0.00098652748546618 | 0.0137665426380962 | 0.0120837816401599 | LSM2/SF3B2/SNRNP27/SNRPA1/SNRPD2 | 5 |
| reactome | B_12_1 | R-HSA-9609507 | Protein localization | 7/107 | 164/11146 | 0.00099880768706325 | 0.00894860054168835 | 0.006676515152561 | ACAA1/FXN/GET3/GRPEL1/MPV17/UBB/UBE2D3 | 7 |
| MeSH_gene2pubmed | B_12_1 | D045222 | D045222 | 3/128 | 40/26076 | 0.0009995568280759 | 0.0448269322626131 | 0.0414044625180029 | FXN/MPV17/NDUFS1 | 3 |
| MeSH_gene2pubmed | B_12_1 | D054325 | vpr Gene Products, Human Immunodeficiency Virus | 6/128 | 231/26076 | 0.00100016198537652 | 0.0448269322626131 | 0.0414044625180029 | IPO5/NUTF2/PPIA/PPP2CA/PTPA/SF3B2 | 6 |
| reactome | B_12_1 | R-HSA-5357801 | Programmed Cell Death | 8/107 | 213/11146 | 0.00100588614031599 | 0.00894860054168835 | 0.006676515152561 | CDC37/CHMP4B/PSMA6/PSMB8/PSME1/PSME3/TFDP1/UBB | 8 |