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Selected Module: B_12_1


Module Info

Module_Name B_12_1
Cell_Type B
Name B_12_1: HALLMARK_MYC_TARGETS_V1
Meta_Module B_3
Gene_Number 129

Genes:

AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330


UMAP Visualizations


UMAP for B_12_1

UMAP for B_12_1


Word Cloud

Enriched TF

Wordcloud for B_12_1
TF p.adjust Genes
NR1I2 0.00225913858449317 AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17
ELF5 0.0190351123169518 BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C
DMRT1 0.0214366259979039 ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_1 D054301 gag Gene Products, Human Immunodeficiency Virus 8/128 152/26076 8.77212940449321e-07 0.00034261431131263 0.00031645621716359 CHMP4B/IPO5/NUTF2/PPIA/PPP2CA/PSMB8/PTPA/UBB 8
GO B_12_1 GO:0009117 nucleotide metabolic process 15/124 500/18986 9.44923532174643e-07 0.00149195525050141 0.00140786346832257 AK2/ATP5PB/ATP5PO/DCTD/DCXR/MDH1/ME2/MLST8/NDUFS1/NME2/OLA1/PGD/PPP2CA/SDHC/TDG 15
reactome B_12_1 R-HSA-1428517 Aerobic respiration and respiratory electron transport 13/107 260/11146 1.15420752490985e-06 0.0003145131485365 0.00023465700498096 ATP5PB/ATP5PO/COA5/FXN/GOT2/KGD4/MDH1/ME2/NDUFS1/SDHAF3/SDHC/SMIM20/UBB 13
MeSH_gene2pubmed B_12_1 D017381 Spliceosomes 12/128 422/26076 1.20859764832121e-06 0.00041303824631377 0.00038150338925297 FRG1/GAR1/HNRNPA3/KHSRP/LSM2/PHAX/RBM17/SF3B2/SMARCA4/SNRNP27/SNRPA1/SNRPD2 12
GO B_12_1 GO:0000313 organellar ribosome 7/127 88/19960 1.47997421952108e-06 0.00010715427536244 9.40562129017142e-05 MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 7
GO B_12_1 GO:0005761 mitochondrial ribosome 7/127 88/19960 1.47997421952108e-06 0.00010715427536244 9.40562129017142e-05 MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 7
MeSH_gene2pubmed B_12_1 D005095 Exoribonucleases 10/128 287/26076 1.61449504587778e-06 0.00049044771726998 0.00045300276199541 ETF1/EXOSC5/KHSRP/LSM2/NARS1/PGD/PSMB8/SMARCA4/SNRPD2/ZNF330 10
reactome B_12_1 R-HSA-5368286 Mitochondrial translation initiation 8/107 87/11146 1.72809422272803e-06 0.0003145131485365 0.00023465700498096 KGD4/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 8
reactome B_12_1 R-HSA-5389840 Mitochondrial translation elongation 8/107 87/11146 1.72809422272803e-06 0.0003145131485365 0.00023465700498096 KGD4/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 8
reactome B_12_1 R-HSA-5419276 Mitochondrial translation termination 8/107 87/11146 1.72809422272803e-06 0.0003145131485365 0.00023465700498096 KGD4/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 8