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Selected Module: B_12_1


Module Info

Module_Name B_12_1
Cell_Type B
Name B_12_1: HALLMARK_MYC_TARGETS_V1
Meta_Module B_3
Gene_Number 129

Genes:

AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330


UMAP Visualizations


UMAP for B_12_1

UMAP for B_12_1


Word Cloud

Enriched TF

Wordcloud for B_12_1
TF p.adjust Genes
NR1I2 0.00225913858449317 AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17
ELF5 0.0190351123169518 BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C
DMRT1 0.0214366259979039 ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_1 D013489 Suppression, Genetic 8/128 378/26076 0.000571722528091 0.031899783506139 0.0294642823821767 ABCE1/CLTB/ETF1/FXN/RAP1A/RBBP4/SMARCA4/VTI1B 8
GO B_12_1 GO:0033108 mitochondrial respiratory chain complex assembly 5/124 103/18986 0.00057569073603866 0.0393462476131039 0.0371285563769064 COA5/FXN/NDUFS1/SDHAF3/SMIM20 5
reactome B_12_1 R-HSA-68949 Orc1 removal from chromatin 5/107 71/11146 0.00058440561284568 0.00644617100229785 0.00480946245978266 PSMA6/PSMB8/PSME1/PSME3/UBB 5
GO B_12_1 GO:0030532 small nuclear ribonucleoprotein complex 5/127 107/19960 0.00061007404778072 0.0104051518149267 0.00913327229426108 LSM2/SF3B2/SNRNP27/SNRPA1/SNRPD2 5
reactome B_12_1 R-HSA-174184 Cdc20:Phospho-APC/C mediated degradation of Cyclin A 5/107 72/11146 0.0006232761051673 0.00657601455886663 0.00490633821916596 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-69017 CDK-mediated phosphorylation and removal of Cdc6 5/107 72/11146 0.0006232761051673 0.00657601455886663 0.00490633821916596 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-8939902 Regulation of RUNX2 expression and activity 5/107 72/11146 0.0006232761051673 0.00657601455886663 0.00490633821916596 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-174178 APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 5/107 73/11146 0.00066405400970018 0.00680889181777089 0.00508008701268042 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-179419 APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint 5/107 73/11146 0.00066405400970018 0.00680889181777089 0.00508008701268042 PSMA6/PSMB8/PSME1/PSME3/UBB 5
MeSH_gene2pubmed B_12_1 D051528 Guanylate Kinases 8/128 387/26076 0.0006665347575197 0.0364461205411774 0.0336635133324162 EXOSC5/LSM2/NARS1/PGD/PSMB8/SMARCA4/SNRPD2/ZNF330 8