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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_12_1 | R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C | 5/107 | 63/11146 | 0.00033523065748406 | 0.00478525330683129 | 0.00357025839549587 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| reactome | B_12_1 | R-HSA-9837999 | Mitochondrial protein degradation | 6/107 | 98/11146 | 0.00035003748870124 | 0.00490052484181749 | 0.00365626202772965 | ATP5PO/ECI1/HTRA2/ME2/NDUFS1/SSBP1 | 6 |
| MeSH_gene2pubmed | B_12_1 | D017393 | RNA Editing | 6/128 | 190/26076 | 0.00035928286739977 | 0.0223245308970678 | 0.0206200860978961 | KHSRP/PSMA6/PSMB8/PSME1/PSME3/UBB | 6 |
| reactome | B_12_1 | R-HSA-4608870 | Asymmetric localization of PCP proteins | 5/107 | 64/11146 | 0.00036089059634407 | 0.00495713875732987 | 0.00369850144416167 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| GO | B_12_1 | GO:0006091 | generation of precursor metabolites and energy | 11/124 | 490/18986 | 0.00037142594671281 | 0.0322628046983618 | 0.0304443609184553 | ATP5PB/ATP5PO/COQ9/FXN/KGD4/MDH1/MLST8/NDUFS1/PGD/PPP2CA/SDHC | 11 |
| MeSH_gene2pubmed | B_12_1 | D055532 | SMN Complex Proteins | 5/128 | 124/26076 | 0.00037202694364786 | 0.0226027036429614 | 0.0208770207675141 | GAR1/KHSRP/LSM2/PHAX/SNRPD2 | 5 |
| GO | B_12_1 | GO:0016072 | rRNA metabolic process | 8/124 | 268/18986 | 0.00038127118664355 | 0.0322628046983618 | 0.0304443609184553 | BMS1/DCAF13/EXOSC5/FRG1/GAR1/GTF3A/RRP36/SMARCA4 | 8 |
| MeSH_gene2pubmed | B_12_1 | D043743 | Ubiquitin-Protein Ligase Complexes | 7/128 | 270/26076 | 0.00038464292515821 | 0.0228611686387512 | 0.0211157523444978 | MAD2L2/PSMA6/PSMB8/PSME1/PSME3/UBB/UBE2D3 | 7 |
| reactome | B_12_1 | R-HSA-5358346 | Hedgehog ligand biogenesis | 5/107 | 65/11146 | 0.00038800927563738 | 0.00515082246572499 | 0.00384300808605277 | PSMA6/PSMB8/PSME1/PSME3/UBB | 5 |
| GO | B_12_1 | GO:0097525 | spliceosomal snRNP complex | 5/127 | 97/19960 | 0.00038900260119649 | 0.0073652868402275 | 0.0064649869058743 | LSM2/SF3B2/SNRNP27/SNRPA1/SNRPD2 | 5 |