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Selected Module: B_12_1


Module Info

Module_Name B_12_1
Cell_Type B
Name B_12_1: HALLMARK_MYC_TARGETS_V1
Meta_Module B_3
Gene_Number 129

Genes:

AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330


UMAP Visualizations


UMAP for B_12_1

UMAP for B_12_1


Word Cloud

Enriched TF

Wordcloud for B_12_1
TF p.adjust Genes
NR1I2 0.00225913858449317 AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17
ELF5 0.0190351123169518 BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C
DMRT1 0.0214366259979039 ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_12_1 R-HSA-69541 Stabilization of p53 5/107 57/11146 0.00020900758264265 0.00400414526746971 0.00298747680453206 PSMA6/PSMB8/PSME1/PSME3/UBB 5
MeSH_gene2pubmed B_12_1 D008929 Mitochondria, Heart 6/128 173/26076 0.00021733450793207 0.0185685170214465 0.0171508383068764 ATP5PB/ATP5PO/FXN/GOT2/ME2/NDUFS1 6
reactome B_12_1 R-HSA-72172 mRNA Splicing 9/107 215/11146 0.00021845662554574 0.0040778570101872 0.00304247284160873 BUD31/HNRNPA3/LSM2/PRPF38A/RBM17/SF3B2/SNRNP27/SNRPA1/SNRPD2 9
MeSH_gene2pubmed B_12_1 D016914 Ribonuclease H 6/128 174/26076 0.00022420213608129 0.0185748072741289 0.0171566483081027 FRG1/HNRNPA3/LSM2/SF3B2/SNRPA1/SNRPD2 6
WikiPathways B_12_1 WP5152 Iron sulfur cluster biogenesis 3/73 15/8836 0.00022924024570639 0.0202877617450157 0.0180979141347151 FXN/NFU1/NUBP2 3
GO B_12_1 GO:0045333 cellular respiration 8/124 249/18986 0.00023271587637136 0.0217650585427327 0.0205383042138277 ATP5PB/ATP5PO/COQ9/FXN/KGD4/MDH1/NDUFS1/SDHC 8
GO B_12_1 GO:0005758 mitochondrial intermembrane space 5/127 87/19960 0.00023460540819081 0.0051445614510415 0.00451571312006386 AK2/HTRA2/NDUFS1/PRELID3B/SDHAF3 5
GO B_12_1 GO:0051539 4 iron, 4 sulfur cluster binding 4/126 45/18737 0.00023465832992542 0.0096060856504053 0.00861246264522475 ABCE1/NDUFS1/NFU1/NUBP2 4
GO B_12_1 GO:0008135 translation factor activity, RNA binding 5/126 83/18737 0.00024242487445817 0.0096060856504053 0.00861246264522475 ABCF1/COPS5/EIF4G2/EIF4H/ETF1 5
reactome B_12_1 R-HSA-5387390 Hh mutants abrogate ligand secretion 5/107 59/11146 0.0002461353836675 0.00412760166699746 0.00307958713153657 PSMA6/PSMB8/PSME1/PSME3/UBB 5