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Selected Module: B_12_1


Module Info

Module_Name B_12_1
Cell_Type B
Name B_12_1: HALLMARK_MYC_TARGETS_V1
Meta_Module B_3
Gene_Number 129

Genes:

AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330


UMAP Visualizations


UMAP for B_12_1

UMAP for B_12_1


Word Cloud

Enriched TF

Wordcloud for B_12_1
TF p.adjust Genes
NR1I2 0.00225913858449317 AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17
ELF5 0.0190351123169518 BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C
DMRT1 0.0214366259979039 ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_12_1 R-HSA-169911 Regulation of Apoptosis 5/107 53/11146 0.00014766774453261 0.00377507609603691 0.00281656920988295 PSMA6/PSMB8/PSME1/PSME3/UBB 5
MeSH_gene2pubmed B_12_1 D000705 Anaphase 7/128 232/26076 0.00015305174295535 0.0139481155079981 0.0128831975912245 CKS2/PPP2CA/PSMA6/PSMB8/PSME1/PSME3/UBB 7
GO B_12_1 GO:0043023 ribosomal large subunit binding 3/126 16/18737 0.00015596896272006 0.0096060856504053 0.00861246264522475 MALSU1/OLA1/RBM3 3
GO B_12_1 GO:0051536 iron-sulfur cluster binding 5/126 76/18737 0.00016014448986187 0.0096060856504053 0.00861246264522475 ABCE1/FXN/NDUFS1/NFU1/NUBP2 5
reactome B_12_1 R-HSA-180585 Vif-mediated degradation of APOBEC3G 5/107 54/11146 0.00016150339983153 0.00377507609603691 0.00281656920988295 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-9604323 Negative regulation of NOTCH4 signaling 5/107 54/11146 0.00016150339983153 0.00377507609603691 0.00281656920988295 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-72163 mRNA Splicing - Major Pathway 9/107 207/11146 0.00016436853337538 0.00377507609603691 0.00281656920988295 BUD31/HNRNPA3/LSM2/PRPF38A/RBM17/SF3B2/SNRNP27/SNRPA1/SNRPD2 9
GO B_12_1 GO:0051540 metal cluster binding 5/126 77/18737 0.00017035132153363 0.0096060856504053 0.00861246264522475 ABCE1/FXN/NDUFS1/NFU1/NUBP2 5
reactome B_12_1 R-HSA-174113 SCF-beta-TrCP mediated degradation of Emi1 5/107 55/11146 0.00017630849899073 0.00377507609603691 0.00281656920988295 PSMA6/PSMB8/PSME1/PSME3/UBB 5
reactome B_12_1 R-HSA-4641257 Degradation of AXIN 5/107 55/11146 0.00017630849899073 0.00377507609603691 0.00281656920988295 PSMA6/PSMB8/PSME1/PSME3/UBB 5