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Selected Module: B_11_8


Module Info

Module_Name B_11_8
Cell_Type B
Name B_11_8: PAFAH1B1 copy number variation
Meta_Module B_6
Gene_Number 25

Genes:

AHI1, ARFGEF2, ARID2, ASXL1, BTAF1, CDC42SE2, CMTR2, DIS3, ELK4, EPC2, GATAD2A, MTREX, NAA15, NDEL1, PAFAH1B2, RAB5A, RNF38, SAMD4B, SUCO, TNKS, TRAPPC10, TTC3, UBE3A, USP7, ZC3H7A


UMAP Visualizations


UMAP for B_11_8

UMAP for B_11_8


Word Cloud

Enriched TF

Wordcloud for B_11_8
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
WikiPathways B_11_8 WP5409 PAFAH1B1 copy number variation 2/13 11/8836 0.00010908857150837 0.00403627714580996 0.00264109173125545 NDEL1/PAFAH1B2 2
GO B_11_8 GO:0000176 nuclear exosome (RNase complex) 2/25 16/19960 0.00017879770144855 0.0195419714549691 0.0145005137629624 DIS3/MTREX 2
GO B_11_8 GO:0000178 exosome (RNase complex) 2/25 23/19960 0.00037494453330192 0.0195419714549691 0.0145005137629624 DIS3/MTREX 2
GO B_11_8 GO:1905354 exoribonuclease complex 2/25 26/19960 0.00048054028167956 0.0195419714549691 0.0145005137629624 DIS3/MTREX 2
KEGG B_11_8 hsa03082 ATP-dependent chromatin remodeling 3/12 117/8541 0.00050366824607872 0.0120880379058893 0.0100733649215744 ARID2/EPC2/GATAD2A 3
WikiPathways B_11_8 WP2853 Endoderm differentiation 3/13 144/8836 0.00107546587263345 0.0198961186437187 0.0130187974055628 BTAF1/ELK4/NAA15 3
hallmark B_11_8 HALLMARK_PROTEIN_SECRETION HALLMARK_PROTEIN_SECRETION 2/5 96/4384 0.00454586961148274 0.018183478445931 0.0143553777204718 ARFGEF2/RAB5A 2
KEGG B_11_8 hsa03018 RNA degradation 2/12 78/8541 0.00512146230365964 0.0462483343513794 0.0385402786261495 DIS3/MTREX 2
KEGG B_11_8 hsa03083 Polycomb repressive complex 2/12 83/8541 0.00578104179392243 0.0462483343513794 0.0385402786261495 ASXL1/USP7 2