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Selected Module: B_11_1
Module Info
| Module_Name | B_11_1 |
| Cell_Type | B |
| Name | B_11_1: CCR4-NOT complex |
| Meta_Module | B_6 |
| Gene_Number | 67 |
Genes:
AEBP2, BZW1, C9orf72, CACUL1, CEBPZ, CNOT1, CNOT2, CNOT6L, COX19, CSNK1D, CWC25, DDX21, DDX27, DNAJB6, EIF1B, ELF1, ERO1B, FBXL3, FBXO21, GGNBP2, GNA13, HBP1, ING3, INTS6, IRF2BP2, IST1, JOSD1, KLHL24, KPNA4, LRRFIP1, MMD, MOB3A, MTMR6, MXI1, NFE2L2, NFKB1, NFKB2, NUP58, PATL1, POLR1F, PPTC7, RAB21, RB1CC1, REL, RPGR, SF1, SFPQ, SIN3A, SNW1, SNX9, SRRM1, STAG2, TBC1D15, TCOF1, TGIF2, TMF1, TSC22D2, TXLNG, UBL3, USP3, WBP11, WDR48, WHAMM, WIPF2, ZBTB1, ZBTB10, ZEB1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PHF21A | 0.00316217081626448 | CSNK1D/FBXO21/MXI1/PATL1/SF1/TCOF1/WHAMM |
| ZID | 0.0122986041843241 | FBXL3/KPNA4/PPTC7/RB1CC1/SNW1/ZEB1 |
| KCCGNSWTTT | 0.0231178183020724 | SF1/SRRM1/STAG2/USP3 |
| AHR | 0.0231178183020724 | CACUL1/ING3/REL/SF1/ZEB1 |
| GCGNNANTTCC | 0.0231178183020724 | BZW1/NFKB2/SIN3A/TGIF2 |
| MZF1 | 0.0231178183020724 | GGNBP2/HBP1/PATL1/REL/ZEB1 |
| NGFIC | 0.0270274526279656 | C9orf72/CNOT6L/REL/SIN3A/WDR48 |
| CREBP1 | 0.0270274526279656 | ING3/JOSD1/TGIF2/TSC22D2/WDR48 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_11_1 | GO:0004527 | exonuclease activity | 3/65 | 84/18737 | 0.00310772052536389 | 0.0466054938539742 | 0.0384192403361867 | CNOT1/CNOT2/CNOT6L | 3 |
| GO | B_11_1 | GO:0008139 | nuclear localization sequence binding | 2/65 | 25/18737 | 0.00337659921086128 | 0.0466054938539742 | 0.0384192403361867 | KPNA4/NUP58 | 2 |
| GO | B_11_1 | GO:0042974 | nuclear retinoic acid receptor binding | 2/65 | 25/18737 | 0.00337659921086128 | 0.0466054938539742 | 0.0384192403361867 | CNOT1/SNW1 | 2 |
| WikiPathways | B_11_1 | WP5381 | Smith Magenis and Potocki Lupski syndrome copy number variation | 4/35 | 159/8836 | 0.00342361261885378 | 0.0423823857174635 | 0.0342709243361308 | C9orf72/HBP1/NFKB1/RB1CC1 | 4 |
| GO | B_11_1 | GO:0050681 | nuclear androgen receptor binding | 2/65 | 26/18737 | 0.00364982783193774 | 0.0466054938539742 | 0.0384192403361867 | SNW1/TMF1 | 2 |
| WikiPathways | B_11_1 | WP262 | Ebstein Barr virus LMP1 signaling | 2/35 | 23/8836 | 0.0036602969483264 | 0.0423823857174635 | 0.0342709243361308 | NFKB1/NFKB2 | 2 |
| WikiPathways | B_11_1 | WP4790 | FGF23 signaling in hypophosphatemic rickets and related disorders | 2/35 | 23/8836 | 0.0036602969483264 | 0.0423823857174635 | 0.0342709243361308 | NFKB1/NFKB2 | 2 |