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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_7 | GO:0032206 | positive regulation of telomere maintenance | 6/54 | 75/18986 | 6.88802663199186e-08 | 1.93877690788712e-06 | 1.41172558216056e-06 | CCT2/CCT3/CCT4/CCT6A/HSP90AA1/TCP1 | 6 |
| reactome | B_10_7 | R-HSA-389957 | Prefoldin mediated transfer of substrate to CCT/TriC | 5/45 | 28/11146 | 7.8252605194709e-08 | 3.96479866319859e-06 | 3.38637004936168e-06 | CCT2/CCT3/CCT4/CCT6A/TCP1 | 5 |
| GO | B_10_7 | GO:0005681 | spliceosomal complex | 8/54 | 207/19960 | 8.07647891410102e-08 | 2.18064930680728e-06 | 1.16187942273032e-06 | EIF4A3/LSM4/SNRNP25/SNRPB/SNRPE/SNRPF/SNRPG/YBX1 | 8 |
| GO | B_10_7 | GO:0008380 | RNA splicing | 11/54 | 484/18986 | 9.38739474081494e-08 | 2.56678193341711e-06 | 1.86900911832165e-06 | C1QBP/DDX39A/EIF4A3/LSM4/SNRNP25/SNRPB/SNRPE/SNRPF/SNRPG/SRSF3/YBX1 | 11 |
| reactome | B_10_7 | R-HSA-75067 | Processing of Capped Intronless Pre-mRNA | 5/45 | 29/11146 | 9.42723894811249e-08 | 4.2988209603393e-06 | 3.67166148505434e-06 | SLBP/SNRPB/SNRPE/SNRPF/SNRPG | 5 |
| MeSH_gene2pubmed | B_10_7 | D019427 | HIV Integrase | 6/54 | 109/26076 | 1.01857197888937e-07 | 1.50186682128653e-05 | 1.06589583126608e-05 | CCT4/HMGA1/HSPE1/PSMD2/RAN/XRCC5 | 6 |
| GO | B_10_7 | GO:0036260 | RNA capping | 4/54 | 16/18986 | 1.03687624728231e-07 | 2.75636269069214e-06 | 2.00705285292658e-06 | SNRPB/SNRPE/SNRPF/SNRPG | 4 |
| GO | B_10_7 | GO:0032392 | DNA geometric change | 6/54 | 83/18986 | 1.26893465721551e-07 | 3.28208234312228e-06 | 2.38985702155524e-06 | HMGA1/HMGB2/MCM3/MCM5/MCM7/XRCC5 | 6 |
| GO | B_10_7 | GO:0046540 | U4/U6 x U5 tri-snRNP complex | 5/54 | 45/19960 | 1.34909022261935e-07 | 3.05879930950045e-06 | 1.62976961259933e-06 | LSM4/SNRPB/SNRPE/SNRPF/SNRPG | 5 |
| GO | B_10_7 | GO:0097526 | spliceosomal tri-snRNP complex | 5/54 | 46/19960 | 1.51051817753109e-07 | 3.05879930950045e-06 | 1.62976961259933e-06 | LSM4/SNRPB/SNRPE/SNRPF/SNRPG | 5 |