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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_7 | GO:0031983 | vesicle lumen | 5/54 | 330/19960 | 0.00195248886447414 | 0.00811033836012335 | 0.00432129789168366 | CCT2/HSP90AA1/PA2G4/PSMD2/XRCC5 | 5 |
| reactome | B_10_7 | R-HSA-9012999 | RHO GTPase cycle | 7/45 | 449/11146 | 0.0019765052668438 | 0.0200285867040171 | 0.0171065952919814 | C1QBP/CCT2/CCT6A/HSP90AA1/HSPE1/NUDC/TUBA1B | 7 |
| MeSH_gene2pubmed | B_10_7 | D005720 | Gamma Rays | 5/54 | 432/26076 | 0.00197956134351185 | 0.0267977428927466 | 0.0190187319087658 | HSP90AA1/PCNA/RAD51C/STMN1/XRCC5 | 5 |
| MeSH_gene2pubmed | B_10_7 | D010582 | Bacteriophage lambda | 4/54 | 257/26076 | 0.00198037576101682 | 0.0267977428927466 | 0.0190187319087658 | HSPE1/SLC25A5/SSRP1/YBX1 | 4 |
| MeSH_gene2pubmed | B_10_7 | D027425 | Multidrug Resistance-Associated Proteins | 4/54 | 257/26076 | 0.00198037576101682 | 0.0267977428927466 | 0.0190187319087658 | MCM7/PCNA/XRCC5/YBX1 | 4 |
| GO | B_10_7 | GO:0006839 | mitochondrial transport | 4/54 | 188/18986 | 0.00200117335808255 | 0.0163685718263675 | 0.0119188192807076 | HSP90AA1/HSPA9/SIVA1/SLC25A5 | 4 |
| MeSH_gene2pubmed | B_10_7 | D007915 | D007915 | 2/54 | 32/26076 | 0.00200625805010026 | 0.0268926627656072 | 0.0190860978664875 | PCNA/XRCC5 | 2 |
| MeSH_gene2pubmed | B_10_7 | D012345 | RNA, Transfer, Amino Acid-Specific | 2/54 | 32/26076 | 0.00200625805010026 | 0.0268926627656072 | 0.0190860978664875 | RAN/RANBP1 | 2 |
| MeSH_gene2pubmed | B_10_7 | D012594 | Scleroderma, Localized | 2/54 | 32/26076 | 0.00200625805010026 | 0.0268926627656072 | 0.0190860978664875 | PCNA/XRCC5 | 2 |
| WikiPathways | B_10_7 | WP179 | Cell cycle | 4/40 | 120/8836 | 0.00202709106023337 | 0.032095608453695 | 0.0277391408242461 | MCM3/MCM5/MCM7/PCNA | 4 |