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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D009630 | Nondisjunction, Genetic | 2/54 | 26/26076 | 0.00132508135880143 | 0.0203814672310608 | 0.0144650115767684 | RANBP1/XRCC5 | 2 |
| MeSH_gene2pubmed | B_10_7 | D019362 | Cytochrome P-450 CYP2B1 | 2/54 | 26/26076 | 0.00132508135880143 | 0.0203814672310608 | 0.0144650115767684 | PCNA/YBX1 | 2 |
| GO | B_10_7 | GO:0061013 | regulation of mRNA catabolic process | 5/54 | 289/18986 | 0.0013570919472396 | 0.0119150182890669 | 0.00867595238119374 | CARHSP1/EIF4A3/HNRNPAB/SERBP1/YBX1 | 5 |
| MeSH_gene2pubmed | B_10_7 | D050720 | Retinoblastoma-Like Protein p107 | 3/54 | 106/26076 | 0.00139295089608379 | 0.021272350113051 | 0.0150972835842465 | MCM7/PCNA/RANBP1 | 3 |
| MeSH_gene2pubmed | B_10_7 | D053484 | RecQ Helicases | 3/54 | 106/26076 | 0.00139295089608379 | 0.021272350113051 | 0.0150972835842465 | PCNA/XRCC5/YBX1 | 3 |
| reactome | B_10_7 | R-HSA-429914 | Deadenylation-dependent mRNA decay | 3/45 | 55/11146 | 0.00139328473761764 | 0.0149141819383766 | 0.0127383363739597 | EIF4A3/EXOSC8/LSM4 | 3 |
| reactome | B_10_7 | R-HSA-162594 | Early Phase of HIV Life Cycle | 2/45 | 14/11146 | 0.00140638119155745 | 0.0149141819383766 | 0.0127383363739597 | HMGA1/XRCC5 | 2 |
| GO | B_10_7 | GO:0000792 | heterochromatin | 3/54 | 82/19960 | 0.0014252938466293 | 0.00679110597511606 | 0.00361839304717035 | H2AZ1/HMGA1/TCP1 | 3 |
| MeSH_gene2pubmed | B_10_7 | D011041 | Poisoning | 2/54 | 27/26076 | 0.0014291914866817 | 0.0215944268447029 | 0.0153258659330606 | NUDT1/PCNA | 2 |
| MeSH_gene2pubmed | B_10_7 | D014238 | Trichloroacetic Acid | 2/54 | 27/26076 | 0.0014291914866817 | 0.0215944268447029 | 0.0153258659330606 | PCNA/PSMD2 | 2 |