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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_10_7 | R-HSA-77588 | SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs | 5/45 | 11/11146 | 3.87075273000364e-10 | 5.84007858494802e-08 | 4.98806342666382e-08 | SLBP/SNRPB/SNRPE/SNRPF/SNRPG | 5 |
| reactome | B_10_7 | R-HSA-389960 | Formation of tubulin folding intermediates by CCT/TriC | 6/45 | 25/11146 | 5.12287595170879e-10 | 5.84007858494802e-08 | 4.98806342666382e-08 | CCT2/CCT3/CCT4/CCT6A/TCP1/TUBA1B | 6 |
| MeSH_gene2pubmed | B_10_7 | D004257 | DNA Polymerase II | 8/54 | 151/26076 | 8.7114920520294e-10 | 4.1389266682753e-07 | 2.93745398666675e-07 | HSP90AA1/HSPA9/MCM3/MCM5/MCM7/NHP2/PCNA/XRCC5 | 8 |
| GO | B_10_7 | GO:0101031 | protein folding chaperone complex | 6/54 | 42/19960 | 1.43321930553832e-09 | 7.73938424990692e-08 | 4.12364852821552e-08 | CCT2/CCT3/CCT4/CCT6A/DNAJC9/TCP1 | 6 |
| GO | B_10_7 | GO:0071897 | DNA biosynthetic process | 9/54 | 175/18986 | 1.4549018168551e-09 | 6.05365669013186e-08 | 4.40798628264565e-08 | CCT2/CCT3/CCT4/CCT6A/HSP90AA1/NHP2/PCNA/TCP1/XRCC5 | 9 |
| MeSH_gene2pubmed | B_10_7 | D018741 | Replication Origin | 8/54 | 165/26076 | 1.76052067153087e-09 | 7.52798639146599e-07 | 5.34271694318262e-07 | C1QBP/MCM3/MCM5/MCM7/PCNA/SSRP1/XRCC5/YBX1 | 8 |
| GO | B_10_7 | GO:0061077 | chaperone-mediated protein folding | 7/54 | 76/18986 | 1.89127347058097e-09 | 7.54145296394164e-08 | 5.49132911195002e-08 | CCT2/CCT3/CCT4/CCT6A/HSPA9/HSPE1/TCP1 | 7 |
| MeSH_gene2pubmed | B_10_7 | D053487 | DEAD-box RNA Helicases | 11/54 | 465/26076 | 2.47428401931713e-09 | 9.61821678781821e-07 | 6.82618261023089e-07 | DDX39A/EIF4A3/HNRNPAB/SNRPB/SNRPE/SNRPF/SNRPG/SRSF3/SSRP1/XRCC5/YBX1 | 11 |
| reactome | B_10_7 | R-HSA-389958 | Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | 6/45 | 32/11146 | 2.56670635968902e-09 | 2.34083620003638e-07 | 1.99932916438934e-07 | CCT2/CCT3/CCT4/CCT6A/TCP1/TUBA1B | 6 |
| MeSH_gene2pubmed | B_10_7 | D005231 | Fatty Acids, Unsaturated | 11/54 | 487/26076 | 3.99960725961987e-09 | 1.31795813495111e-06 | 9.35373271395808e-07 | C1QBP/CCT2/CCT3/CCT4/CCT6A/HNRNPAB/HSP90AA1/RAN/RANBP1/SNRPB/TCP1 | 11 |