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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D003854 | Deoxyribonucleotides | 3/54 | 82/26076 | 0.00066222005168516 | 0.0124742420308625 | 0.0088531435613649 | PCNA/XRCC5/YBX1 | 3 |
| MeSH_gene2pubmed | B_10_7 | D035463 | Pol1 Transcription Initiation Complex Proteins | 3/54 | 82/26076 | 0.00066222005168516 | 0.0124742420308625 | 0.0088531435613649 | SNRPE/XRCC5/YBX1 | 3 |
| MeSH_gene2pubmed | B_10_7 | D019309 | Epstein-Barr Virus Nuclear Antigens | 4/54 | 192/26076 | 0.00067570227539873 | 0.0126723812701973 | 0.00899376574318815 | C1QBP/PCNA/PSMD2/XRCC5 | 4 |
| MeSH_gene2pubmed | B_10_7 | D020332 | Rats, Inbred LEC | 2/54 | 19/26076 | 0.00070370186155576 | 0.0131398653275653 | 0.00932554569921981 | PCNA/XRCC5 | 2 |
| GO | B_10_7 | GO:0009263 | deoxyribonucleotide biosynthetic process | 2/54 | 14/18986 | 0.00070688930266686 | 0.0065678938121572 | 0.00478242941610083 | DTYMK/DUT | 2 |
| GO | B_10_7 | GO:0009265 | 2'-deoxyribonucleotide biosynthetic process | 2/54 | 14/18986 | 0.00070688930266686 | 0.0065678938121572 | 0.00478242941610083 | DTYMK/DUT | 2 |
| GO | B_10_7 | GO:0046385 | deoxyribose phosphate biosynthetic process | 2/54 | 14/18986 | 0.00070688930266686 | 0.0065678938121572 | 0.00478242941610083 | DTYMK/DUT | 2 |
| GO | B_10_7 | GO:2000622 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 2/54 | 14/18986 | 0.00070688930266686 | 0.0065678938121572 | 0.00478242941610083 | EIF4A3/HNRNPAB | 2 |
| MeSH_gene2pubmed | B_10_7 | D007147 | Immunoglobulin Light Chains | 4/54 | 195/26076 | 0.00071600001920821 | 0.0133113742701492 | 0.0094472679879967 | HMGA1/PCNA/SNRPE/XRCC5 | 4 |
| MeSH_gene2pubmed | B_10_7 | D018053 | D018053 | 4/54 | 196/26076 | 0.0007298027889489 | 0.0135092498941364 | 0.00958770307833074 | PCNA/VRK1/XRCC5/YBX1 | 4 |