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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_7 | GO:0034708 | methyltransferase complex | 4/54 | 103/19960 | 0.0001734591286922 | 0.00100358495886205 | 0.00053472362980304 | SNRPB/SNRPE/SNRPF/SNRPG | 4 |
| reactome | B_10_7 | R-HSA-69206 | G1/S Transition | 5/45 | 131/11146 | 0.00017408162686582 | 0.00264604072836047 | 0.00226000708562644 | MCM3/MCM5/MCM7/PCNA/PSMD2 | 5 |
| MeSH_gene2pubmed | B_10_7 | D013090 | Spermatocytes | 5/54 | 254/26076 | 0.0001806109045921 | 0.00495059120535803 | 0.00351350362981813 | NASP/PCNA/RAN/SRSF3/XRCC5 | 5 |
| MeSH_gene2pubmed | B_10_7 | D018869 | Heat-Shock Response | 5/54 | 254/26076 | 0.0001806109045921 | 0.00495059120535803 | 0.00351350362981813 | HMGA1/HNRNPAB/HSP90AA1/PCNA/XRCC5 | 5 |
| reactome | B_10_7 | R-HSA-68949 | Orc1 removal from chromatin | 4/45 | 71/11146 | 0.00018492813461143 | 0.00272023320589719 | 0.00232337554520305 | MCM3/MCM5/MCM7/PSMD2 | 4 |
| MeSH_gene2pubmed | B_10_7 | D004264 | DNA Topoisomerases, Type I | 5/54 | 256/26076 | 0.00018730692084458 | 0.0050719772102907 | 0.00359965297062382 | C1QBP/HMGA1/PCNA/SNRPB/XRCC5 | 5 |
| MeSH_gene2pubmed | B_10_7 | D024001 | HMGN Proteins | 2/54 | 10/26076 | 0.00018741169299016 | 0.0050719772102907 | 0.00359965297062382 | HMGB2/HMGN2 | 2 |
| WikiPathways | B_10_7 | WP45 | G1 to S cell cycle control | 4/40 | 64/8836 | 0.00018811182801482 | 0.00357412473228166 | 0.00308899422845395 | MCM3/MCM5/MCM7/PCNA | 4 |
| GO | B_10_7 | GO:0000217 | DNA secondary structure binding | 3/54 | 39/18737 | 0.00019214964023422 | 0.00210083606656082 | 0.00138887108379823 | HMGA1/HMGB2/RAD51C | 3 |
| GO | B_10_7 | GO:0000724 | double-strand break repair via homologous recombination | 5/54 | 188/18986 | 0.00019263227887219 | 0.0021189550675941 | 0.00154292279024066 | C1QBP/MCM3/MCM5/MCM7/RAD51C | 5 |