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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D012341 | RNA, Ribosomal, 5S | 3/54 | 46/26076 | 0.00011964496182863 | 0.00355279067207805 | 0.00252146509467801 | PA2G4/XRCC5/YBX1 | 3 |
| MeSH_gene2pubmed | B_10_7 | D006515 | Hepatitis B virus | 6/54 | 375/26076 | 0.00012261745734052 | 0.00361594653509024 | 0.00256628769156249 | HSPA9/MCM7/PCNA/RANBP1/STMN1/YBX1 | 6 |
| MeSH_gene2pubmed | B_10_7 | D025842 | SUMO-1 Protein | 6/54 | 377/26076 | 0.00012622198468048 | 0.00369674798968312 | 0.00262363361091439 | PA2G4/PCNA/RAN/RANBP1/SSRP1/XRCC5 | 6 |
| MeSH_gene2pubmed | B_10_7 | D013489 | Suppression, Genetic | 6/54 | 378/26076 | 0.00012805555949548 | 0.00372493586668508 | 0.0026436389403902 | HSP90AA1/MCM5/PCNA/SLBP/SLC25A5/YBX1 | 6 |
| GO | B_10_7 | GO:0051168 | nuclear export | 5/54 | 173/18986 | 0.00013065141891545 | 0.00154362231977885 | 0.00112399271373656 | DDX39A/EIF4A3/HSPA9/RAN/SRSF3 | 5 |
| MeSH_gene2pubmed | B_10_7 | D004004 | Dichlororibofuranosylbenzimidazole | 4/54 | 126/26076 | 0.00013632895678517 | 0.00393880148117158 | 0.00279542235001174 | PCNA/RAN/RANBP1/SRSF3 | 4 |
| GO | B_10_7 | GO:1903311 | regulation of mRNA metabolic process | 7/54 | 406/18986 | 0.00014458767996165 | 0.00168744402101593 | 0.00122871686950728 | C1QBP/CARHSP1/EIF4A3/HNRNPAB/SERBP1/SRSF3/YBX1 | 7 |
| reactome | B_10_7 | R-HSA-5617833 | Cilium Assembly | 6/45 | 201/11146 | 0.00014468134799689 | 0.00244350721061428 | 0.0020870213941073 | CCT2/CCT3/CCT4/HSP90AA1/TCP1/TUBA1B | 6 |
| MeSH_gene2pubmed | B_10_7 | D016336 | Gene Products, vpr | 5/54 | 245/26076 | 0.00015271269506393 | 0.00438254687310987 | 0.00311035464407852 | HMGA1/HSPA9/RAN/SLC25A5/XRCC5 | 5 |
| GO | B_10_7 | GO:0006405 | RNA export from nucleus | 4/54 | 95/18986 | 0.00015358930393218 | 0.00177090317907349 | 0.00128948787828922 | DDX39A/EIF4A3/RAN/SRSF3 | 4 |