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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D055503 | Protein Multimerization | 5/54 | 189/26076 | 4.49815313251036e-05 | 0.0016439404097961 | 0.00116672743868892 | RAN/SNRPB/SNRPE/SNRPF/SNRPG | 5 |
| GO | B_10_7 | GO:0032993 | protein-DNA complex | 6/54 | 240/19960 | 4.52505740170891e-05 | 0.00028194588426032 | 0.00015022457770855 | H2AZ1/MCM3/MCM5/MCM7/PCNA/XRCC5 | 6 |
| MeSH_gene2pubmed | B_10_7 | D013724 | Teratoma | 5/54 | 191/26076 | 4.72910023906889e-05 | 0.00171369767985242 | 0.00121623514622976 | LSM4/PCNA/RAN/SNRPE/YBX1 | 5 |
| GO | B_10_7 | GO:0005874 | microtubule | 8/54 | 489/19960 | 4.73888206658016e-05 | 0.00028433292399481 | 0.00015149642474057 | CCT2/CCT3/CCT4/CCT6A/NUDC/STMN1/TCP1/TUBA1B | 8 |
| GO | B_10_7 | GO:0006913 | nucleocytoplasmic transport | 7/54 | 340/18986 | 4.77276087928772e-05 | 0.00063803300886805 | 0.00046458543900418 | DDX39A/EIF4A3/HSP90AA1/HSPA9/RAN/RANBP1/SRSF3 | 7 |
| GO | B_10_7 | GO:0051169 | nuclear transport | 7/54 | 340/18986 | 4.77276087928772e-05 | 0.00063803300886805 | 0.00046458543900418 | DDX39A/EIF4A3/HSP90AA1/HSPA9/RAN/RANBP1/SRSF3 | 7 |
| GO | B_10_7 | GO:0034728 | nucleosome organization | 5/54 | 140/18986 | 4.80024834258098e-05 | 0.00063803300886805 | 0.00046458543900418 | DNAJC9/HMGA1/HMGB2/NASP/SSRP1 | 5 |
| reactome | B_10_7 | R-HSA-5620920 | Cargo trafficking to the periciliary membrane | 4/45 | 51/11146 | 5.04427580640969e-05 | 0.00104554080351037 | 0.00089300576477109 | CCT2/CCT3/CCT4/TCP1 | 4 |
| reactome | B_10_7 | R-HSA-9754678 | SARS-CoV-2 modulates host translation machinery | 4/45 | 51/11146 | 5.04427580640969e-05 | 0.00104554080351037 | 0.00089300576477109 | SNRPB/SNRPE/SNRPF/SNRPG | 4 |
| MeSH_gene2pubmed | B_10_7 | D000907 | Antibodies, Bacterial | 5/54 | 194/26076 | 5.09261200144721e-05 | 0.00182991671581414 | 0.00129871741708733 | C1QBP/ENO1/NASP/PCNA/XRCC5 | 5 |