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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D004270 | DNA, Circular | 5/54 | 174/26076 | 3.03140233472193e-05 | 0.00125847343526903 | 0.00089315615033248 | MCM3/PCNA/SSRP1/XRCC5/YBX1 | 5 |
| MeSH_gene2pubmed | B_10_7 | D053843 | DNA Mismatch Repair | 4/54 | 87/26076 | 3.21820080164935e-05 | 0.00132317563729352 | 0.00093907620558249 | MCM7/NUDT1/PCNA/XRCC5 | 4 |
| GO | B_10_7 | GO:0141188 | nucleic acid catabolic process | 8/54 | 441/18986 | 3.24301739400797e-05 | 0.00046321905165158 | 0.00033729418929038 | CARHSP1/EIF4A3/EXOSC8/HNRNPAB/LSM4/MRTO4/SERBP1/YBX1 | 8 |
| MeSH_gene2pubmed | B_10_7 | D015368 | Human T-lymphotropic virus 1 | 7/54 | 439/26076 | 3.27011904066985e-05 | 0.00133171704932422 | 0.00094513816483721 | PCNA/RAN/RANBP1/SLC25A5/STMN1/XRCC5/YBX1 | 7 |
| GO | B_10_7 | GO:0034504 | protein localization to nucleus | 7/54 | 321/18986 | 3.31357941689167e-05 | 0.00046633757381843 | 0.00033956494953286 | CCT2/CCT3/CCT4/CCT6A/HSP90AA1/RAN/TCP1 | 7 |
| GO | B_10_7 | GO:0006302 | double-strand break repair | 7/54 | 323/18986 | 3.44721500163744e-05 | 0.0004781137328358 | 0.0003481397911646 | C1QBP/HMGB2/MCM3/MCM5/MCM7/RAD51C/XRCC5 | 7 |
| MeSH_gene2pubmed | B_10_7 | D008540 | Meiosis | 7/54 | 443/26076 | 3.46398983324776e-05 | 0.0013973604270724 | 0.00099172618562594 | PCNA/RAD51C/RAN/RANBP1/SLBP/SRSF3/XRCC5 | 7 |
| reactome | B_10_7 | R-HSA-162906 | HIV Infection | 7/45 | 231/11146 | 3.47925400846232e-05 | 0.0007932699139294 | 0.00067753893849003 | HMGA1/PSMD2/RAN/RANBP1/SLC25A5/SSRP1/XRCC5 | 7 |
| WikiPathways | B_10_7 | WP466 | DNA replication | 4/40 | 42/8836 | 3.56016039661648e-05 | 0.00084553809419641 | 0.00073076976562127 | MCM3/MCM5/MCM7/PCNA | 4 |
| MeSH_gene2pubmed | B_10_7 | D034641 | Heterogeneous-Nuclear Ribonucleoprotein K | 4/54 | 90/26076 | 3.67736577536099e-05 | 0.00146957159396669 | 0.0010429754579799 | C1QBP/SRSF3/STMN1/YBX1 | 4 |