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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_7 | GO:0051236 | establishment of RNA localization | 6/54 | 167/18986 | 7.70810574320233e-06 | 0.0001294150385306 | 9.42339058541079e-05 | DDX39A/EIF4A3/RAN/SLBP/SRSF3/YBX1 | 6 |
| MeSH_gene2pubmed | B_10_7 | D013942 | Thymine Nucleotides | 5/54 | 132/26076 | 7.98357561693368e-06 | 0.0004267221167251 | 0.00030285063820552 | DTYMK/EXOSC8/PCNA/SSRP1/XRCC5 | 5 |
| GO | B_10_7 | GO:0033044 | regulation of chromosome organization | 7/54 | 258/18986 | 8.10158706528515e-06 | 0.0001336761865772 | 9.73366721818288e-05 | CCT2/CCT3/CCT4/CCT6A/HSP90AA1/TCP1/XRCC5 | 7 |
| MeSH_gene2pubmed | B_10_7 | D052241 | Fanconi Anemia Complementation Group G Protein | 4/54 | 62/26076 | 8.38018564394963e-06 | 0.00044239103473492 | 0.00031397108786883 | CCT3/ENO1/HSP90AA1/TCP1 | 4 |
| MeSH_gene2pubmed | B_10_7 | D015694 | Gene Products, rev | 5/54 | 136/26076 | 9.23195968659239e-06 | 0.00048141292219352 | 0.00034166546567966 | C1QBP/RAN/RANBP1/TUBA1B/YBX1 | 5 |
| GO | B_10_7 | GO:0009451 | RNA modification | 6/54 | 173/18986 | 9.43310804195868e-06 | 0.00015300821010431 | 0.00011141333673107 | HNRNPAB/NHP2/SNRPB/SNRPE/SNRPF/SNRPG | 6 |
| MeSH_gene2pubmed | B_10_7 | D044786 | S-Phase Kinase-Associated Proteins | 6/54 | 237/26076 | 9.48912466876492e-06 | 0.00048886141064625 | 0.00034695176182687 | HSP90AA1/MCM3/MCM5/MCM7/PCNA/TUBA1B | 6 |
| GO | B_10_7 | GO:0006271 | DNA strand elongation involved in DNA replication | 3/54 | 15/18986 | 9.6593144725758e-06 | 0.00015406606583758 | 0.00011218361720781 | MCM3/MCM7/PCNA | 3 |
| MeSH_gene2pubmed | B_10_7 | D002479 | Inclusion Bodies | 7/54 | 364/26076 | 9.82340911633536e-06 | 0.00050005830216011 | 0.00035489835190971 | CCT2/CCT3/CCT4/CCT6A/PCNA/TCP1/XRCC5 | 7 |
| GO | B_10_7 | GO:0030532 | small nuclear ribonucleoprotein complex | 5/54 | 107/19960 | 1.03403358496264e-05 | 7.28319307669336e-05 | 3.88058370558061e-05 | LSM4/SNRPB/SNRPE/SNRPF/SNRPG | 5 |