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Selected Module: B_10_7
Module Info
| Module_Name | B_10_7 |
| Cell_Type | B |
| Name | B_10_7: HALLMARK_E2F_TARGETS |
| Meta_Module | B_9 |
| Gene_Number | 55 |
Genes:
BZW2, C19orf48P, C1QBP, CARHSP1, CCT2, CCT3, CCT4, CCT6A, DDX39A, DNAJC9, DTYMK, DUT, EIF4A3, ENO1, EXOSC8, H2AZ1, HMGA1, HMGB2, HMGN2, HNRNPAB, HSP90AA1, HSPA9, HSPE1, LSM4, MCM3, MCM5, MCM7, MRTO4, NASP, NHP2, NUDC, NUDT1, PA2G4, PCNA, PSMD2, RAD51C, RAN, RANBP1, SERBP1, SIVA1, SLBP, SLC25A5, SNRNP25, SNRPB, SNRPE, SNRPF, SNRPG, SRSF3, SSRP1, STMN1, TCP1, TUBA1B, VRK1, XRCC5, YBX1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F | 3.75169733798822e-10 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/SLBP/STMN1 |
| E2F | 3.75169733798822e-10 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/RANBP1/SERBP1/SLBP/STMN1/TCP1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1/TCP1 |
| E2F1 | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F | 2.08944928636572e-09 | H2AZ1/HMGA1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.08944928636572e-09 | DNAJC9/H2AZ1/HMGA1/MCM3/MCM7/NASP/PCNA/RANBP1/SERBP1/STMN1 |
| E2F1 | 2.80328444013542e-09 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/SERBP1/STMN1/TCP1 |
| E2F | 2.68835611224921e-08 | DNAJC9/H2AZ1/HMGN2/MCM3/MCM7/NASP/PCNA/RANBP1/STMN1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_7 | D028961 | beta Karyopherins | 6/54 | 183/26076 | 2.14891504652216e-06 | 0.00016706837707143 | 0.00011857075749518 | PCNA/RAN/RANBP1/SLBP/SNRPB/XRCC5 | 6 |
| reactome | B_10_7 | R-HSA-391251 | Protein folding | 6/45 | 96/11146 | 2.16600002056506e-06 | 5.80997652575099e-05 | 4.96235298829147e-05 | CCT2/CCT3/CCT4/CCT6A/TCP1/TUBA1B | 6 |
| GO | B_10_7 | GO:0031625 | ubiquitin protein ligase binding | 8/54 | 301/18737 | 2.21395033763509e-06 | 7.26175710744308e-05 | 4.80077652160871e-05 | CCT2/HSP90AA1/HSPA9/PA2G4/SLC25A5/TCP1/TUBA1B/XRCC5 | 8 |
| MeSH_gene2pubmed | B_10_7 | D012331 | RNA, Fungal | 6/54 | 188/26076 | 2.51186562306455e-06 | 0.00019179888221828 | 0.00013612234194163 | DDX39A/PCNA/RAN/RANBP1/SLC25A5/XRCC5 | 6 |
| MeSH_gene2pubmed | B_10_7 | D009046 | Motor Neurons | 8/54 | 426/26076 | 2.56170094878979e-06 | 0.00019217251328114 | 0.00013638751311839 | PCNA/SNRPB/SNRPE/SNRPF/SNRPG/STMN1/TCP1/YBX1 | 8 |
| WikiPathways | B_10_7 | WP2446 | Retinoblastoma gene in cancer | 6/40 | 89/8836 | 2.56823541548882e-06 | 8.22794967253356e-05 | 7.11113655908718e-05 | H2AZ1/HMGB2/MCM3/MCM7/PCNA/STMN1 | 6 |
| WikiPathways | B_10_7 | WP411 | mRNA processing | 7/40 | 140/8836 | 2.59829989658955e-06 | 8.22794967253356e-05 | 7.11113655908718e-05 | HNRNPAB/SNRPB/SNRPE/SNRPF/SNRPG/SRSF3/YBX1 | 7 |
| GO | B_10_7 | GO:0032508 | DNA duplex unwinding | 5/54 | 77/18986 | 2.60443687262329e-06 | 5.19259601479269e-05 | 3.78100265279961e-05 | HMGA1/MCM3/MCM5/MCM7/XRCC5 | 5 |
| MeSH_gene2pubmed | B_10_7 | D005199 | Fanconi Anemia | 6/54 | 190/26076 | 2.67036843492742e-06 | 0.00019539882072743 | 0.0001386772685139 | CCT3/ENO1/HSP90AA1/PCNA/RAD51C/TCP1 | 6 |
| MeSH_gene2pubmed | B_10_7 | D052217 | Fanconi Anemia Complementation Group A Protein | 5/54 | 106/26076 | 2.72425685553722e-06 | 0.00019539882072743 | 0.0001386772685139 | CCT3/ENO1/HSP90AA1/PCNA/TCP1 | 5 |