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Selected Module: B_10_3
Module Info
| Module_Name | B_10_3 |
| Cell_Type | B |
| Name | B_10_3: B naive |
| Meta_Module | B_8 |
| Gene_Number | 83 |
Genes:
ABCB4, AGPAT5, AKAP10, APP, ARB2A, ATXN7L3B, BBX, BCL11A, CCDC91, CCDC93, CD2AP, CEP120, CIR1, CLK4, CNOT4, CREBBP, CTDSPL2, CWF19L2, ELF2, ELP2, FAM53B, FBXW11, FNIP1, GNB5, GPBP1, GSAP, HGSNAT, HIP1R, HPS4, INO80, JARID2, KDM4C, KLF7, KRR1, LPP, MANBA, MCTP2, MGAT5, MTF2, N4BP2L1, NPAT, NR3C1, NUAK2, NUP107, NUP88, PAWR, PCGF5, PIK3CA, PLEKHA1, PLEKHG1, PPIL4, PRPF3, RNMT, RSBN1, SESTD1, SHISAL2A, SLC9A7, SMAD3, SRFBP1, SSBP2, SSH2, STIM1, SYS1, TAF7, TEX10, TNFRSF13C, TRAF5, TSPYL1, UBAC2, UBE2E2, USF3, USPL1, UTRN, VAV3, VEZF1, WASHC4, ZCCHC10, ZFP14, ZHX2, ZNF131, ZNF274, ZNF75A, ZNF83
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| CEBPGAMMA | 0.0311391382075487 | FAM53B/GPBP1/JARID2/KLF7/SSH2 |
| PITX2 | 0.0311391382075487 | APP/BCL11A/CD2AP/USPL1/VEZF1 |
| AP4 | 0.0311391382075487 | BCL11A/GPBP1/MCTP2/SSBP2/VEZF1 |
| AFP1 | 0.0311391382075487 | BBX/CTDSPL2/JARID2/MCTP2/ZHX2 |
| PAX4 | 0.0311391382075487 | BCL11A/JARID2/PLEKHA1/SSH2/ZHX2 |
| TTAYRTAA | 0.0311391382075487 | BCL11A/GPBP1/MCTP2/UTRN/ZHX2 |
| ACCTGTTG | 0.0317100968266997 | BCL11A/NR3C1/SESTD1/ZHX2 |
| SMTTTTGT | 0.0317100968266997 | APP/BCL11A/CLK4/JARID2/KLF7/USPL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| onek1k | B_10_3 | B naive | B naive | 8/36 | 196/6471 | 8.96452354211913e-06 | 4.48226177105957e-05 | 9.43634057065172e-06 | ABCB4/BCL11A/HIP1R/NUAK2/PAWR/SESTD1/TNFRSF13C/TRAF5 | 8 |
| WikiPathways | B_10_3 | WP2853 | Endoderm differentiation | 6/36 | 144/8836 | 2.19722543802961e-05 | 0.00465811792862277 | 0.00425567874313103 | APP/JARID2/MTF2/NR3C1/SMAD3/VAV3 | 6 |
| KEGG | B_10_3 | hsa03083 | Polycomb repressive complex | 5/36 | 83/8541 | 2.2838656836875e-05 | 0.00367702375073688 | 0.00348590025404935 | CREBBP/JARID2/MTF2/PCGF5/TEX10 | 5 |
| onek1k | B_10_3 | B intermediate | B intermediate | 8/36 | 233/6471 | 3.16442951763011e-05 | 7.91107379407528e-05 | 1.66548921980532e-05 | ABCB4/BCL11A/GSAP/HIP1R/PAWR/PLEKHG1/TNFRSF13C/TRAF5 | 8 |
| GO | B_10_3 | GO:0034708 | methyltransferase complex | 5/80 | 103/19960 | 5.86882284937166e-05 | 0.0127940338116302 | 0.0117994227813683 | JARID2/MTF2/RNMT/TAF7/TEX10 | 5 |
| GO | B_10_3 | GO:0035097 | histone methyltransferase complex | 4/80 | 70/19960 | 0.0001794313906719 | 0.0195580215832376 | 0.0180375766412283 | JARID2/MTF2/TAF7/TEX10 | 4 |
| GO | B_10_3 | GO:0005802 | trans-Golgi network | 6/80 | 269/19960 | 0.00073958304407311 | 0.0436089586526943 | 0.0402187885208335 | APP/CCDC91/CD2AP/GSAP/SLC9A7/SYS1 | 6 |
| GO | B_10_3 | GO:0005641 | nuclear envelope lumen | 2/80 | 11/19960 | 0.0008523051459488 | 0.0436089586526943 | 0.0402187885208335 | APP/CD2AP | 2 |
| GO | B_10_3 | GO:0031519 | PcG protein complex | 3/80 | 49/19960 | 0.00100020547368565 | 0.0436089586526943 | 0.0402187885208335 | JARID2/MTF2/PCGF5 | 3 |
| onek1k | B_10_3 | B memory | B memory | 5/36 | 198/6471 | 0.0044416693697772 | 0.007402782282962 | 0.00155848048062358 | BCL11A/HIP1R/PAWR/TNFRSF13C/TRAF5 | 5 |