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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_10_12 | R-HSA-9824443 | Parasitic Infection Pathways | 8/43 | 164/11146 | 1.73305765518092e-07 | 4.72258211036801e-06 | 3.55732887116084e-06 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CALM2 | 8 |
| GO | B_10_12 | GO:1902743 | regulation of lamellipodium organization | 5/48 | 53/18986 | 2.18411125541705e-07 | 1.71331394036049e-05 | 1.32962562391179e-05 | ACTR3/ARPC2/CAPZB/RAC2/TWF2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D019039 | Platelet Glycoprotein GPIIb-IIIa Complex | 7/50 | 233/26076 | 2.99371408929427e-07 | 2.1050086782152e-05 | 1.58014082006359e-05 | ACTB/CSK/ILK/PTPN6/RHOA/RPS6KA1/VASP | 7 |
| MeSH_gene2pubmed | B_10_12 | D051417 | Focal Adhesion Kinase 1 | 9/50 | 486/26076 | 3.20498709649473e-07 | 2.17176529064465e-05 | 1.63025218036372e-05 | ACTB/ARL6IP5/CSK/ILK/LCP1/PFN1/PTPN6/RHOA/VASP | 9 |
| MeSH_gene2pubmed | B_10_12 | D022461 | Caveolins | 8/50 | 351/26076 | 3.2651489538339e-07 | 2.17176529064465e-05 | 1.63025218036372e-05 | ACTB/ANXA6/CSK/ILK/PPP1CA/PTPN6/RHOA/RHOG | 8 |
| MeSH_gene2pubmed | B_10_12 | D015011 | D015011 | 4/50 | 32/26076 | 4.13324540922225e-07 | 2.67682025055156e-05 | 2.0093755382784e-05 | ACTR3/RHOA/RHOG/RPS6KA1 | 4 |
| MeSH_gene2pubmed | B_10_12 | D051567 | Proto-Oncogene Proteins c-vav | 7/50 | 258/26076 | 5.945637461574e-07 | 3.7518496904958e-05 | 2.81635458706137e-05 | ACTB/ARHGDIB/HCLS1/PTPN6/RHOA/RHOG/VASP | 7 |
| GO | B_10_12 | GO:0010592 | positive regulation of lamellipodium assembly | 4/48 | 28/18986 | 7.04040885051757e-07 | 5.23213541943726e-05 | 4.06042416254226e-05 | ACTR3/ARPC2/RAC2/TWF2 | 4 |
| MeSH_gene2pubmed | B_10_12 | D013947 | Thymosin | 6/50 | 164/26076 | 7.13634124250613e-07 | 4.3906339494519e-05 | 3.29586286331533e-05 | ACTB/ACTR3/ILK/PFN1/TMSB4X/VASP | 6 |
| GO | B_10_12 | GO:0120032 | regulation of plasma membrane bounded cell projection assembly | 7/48 | 205/18986 | 7.81365688928836e-07 | 5.51644176383758e-05 | 4.28106148513115e-05 | ACTR3/ARPC2/CAPZB/PFN1/RAC2/RHOG/TWF2 | 7 |