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Selected Module: B_10_12


Module Info

Module_Name B_10_12
Cell_Type B
Name B_10_12: actin filament organization
Meta_Module B_13
Gene_Number 50

Genes:

ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP


UMAP Visualizations


UMAP for B_10_12

UMAP for B_10_12


Word Cloud

Enriched TF

Wordcloud for B_10_12
TF p.adjust Genes
SRF 3.9374041695952e-11 ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3
SRF 3.9374041695952e-11 ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP
SRF 5.15518863810196e-08 ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1
SRF 5.15654404051782e-08 ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3
ELK1 1.02349670677999e-07 ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP
SRF 4.72727443461202e-07 ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP
ETS 8.25848206285004e-07 ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C
NERF 1.64933095087325e-05 ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_10_12 D051300 Wiskott-Aldrich Syndrome Protein Family 7/50 109/26076 1.58031730343931e-09 2.59277392250943e-07 1.94628552107789e-07 ACTB/ACTR3/ARPC1B/ARPC3/PFN1/RHOG/VASP 7
GO B_10_12 GO:0034314 Arp2/3 complex-mediated actin nucleation 6/48 46/18986 1.6390041201018e-09 1.54284921172249e-07 1.19733564142173e-07 ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5 6
reactome B_10_12 R-HSA-9664407 Parasite infection 7/43 59/11146 2.24146250765121e-09 8.14398044446608e-08 6.13452896830859e-08 ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5 7
reactome B_10_12 R-HSA-9664417 Leishmania phagocytosis 7/43 59/11146 2.24146250765121e-09 8.14398044446608e-08 6.13452896830859e-08 ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5 7
reactome B_10_12 R-HSA-9664422 FCGR3A-mediated phagocytosis 7/43 59/11146 2.24146250765121e-09 8.14398044446608e-08 6.13452896830859e-08 ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5 7
MeSH_gene2pubmed B_10_12 D015800 Protozoan Proteins 10/50 392/26076 3.16209777285975e-09 4.8637016368799e-07 3.65097473116372e-07 ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/PFN1/PTPN6/TPM3/VASP 10
GO B_10_12 GO:1902903 regulation of supramolecular fiber organization 11/48 400/18986 3.55282557556106e-09 3.13536857043264e-07 2.43321804220991e-07 ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/RHOA/TMSB4X/TWF2/VASP 11
MeSH_gene2pubmed B_10_12 D051317 Wiskott-Aldrich Syndrome Protein, Neuronal 6/50 71/26076 4.74688462503798e-09 6.77257568260934e-07 5.08388559335289e-07 ACTR3/ARPC1B/ARPC2/PFN1/RHOG/VASP 6
MeSH_gene2pubmed B_10_12 D022081 Cell Surface Extensions 8/50 204/26076 4.95352955249769e-09 6.77257568260934e-07 5.08388559335289e-07 ACTR3/CSK/ILK/PFN1/RHOA/RHOG/SYTL1/VASP 8
MeSH_gene2pubmed B_10_12 D051304 Profilins 7/50 130/26076 5.43507035726674e-09 7.0398463943334e-07 5.28451439169149e-07 ACTB/ACTR3/CAP1/PFN1/RHOA/TMSB4X/VASP 7