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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:1904724 | tertiary granule lumen | 2/50 | 55/19960 | 0.00839105102955794 | 0.0382588232624865 | 0.0230435918327388 | CNN2/PTPN6 | 2 |
| KEGG | B_10_12 | hsa04024 | cAMP signaling pathway | 4/31 | 226/8541 | 0.0085723685421078 | 0.0414331146201877 | 0.0289505428834342 | CALM2/PPP1CA/RAC2/RHOA | 4 |
| GO | B_10_12 | GO:0030426 | growth cone | 3/50 | 168/19960 | 0.00859289078622691 | 0.0382588232624865 | 0.0230435918327388 | ARPC3/CFL1/TWF2 | 3 |
| GO | B_10_12 | GO:0016459 | myosin complex | 2/50 | 57/19960 | 0.00898962095046839 | 0.0390943980869207 | 0.0235468651578976 | MYL12A/MYO1G | 2 |
| GO | B_10_12 | GO:0030427 | site of polarized growth | 3/50 | 173/19960 | 0.00930659564327916 | 0.0395530314839364 | 0.0238231036801644 | ARPC3/CFL1/TWF2 | 3 |
| KEGG | B_10_12 | hsa04820 | Cytoskeleton in muscle cells | 4/31 | 232/8541 | 0.00938311776585508 | 0.0435376664335676 | 0.0304210554935091 | ACTB/CAPZB/PDLIM1/TPM3 | 4 |
| GO | B_10_12 | GO:0101003 | ficolin-1-rich granule membrane | 2/50 | 61/19960 | 0.010242315786981 | 0.0425625122703434 | 0.0256357377592274 | RHOA/TBC1D10C | 2 |
| GO | B_10_12 | GO:0035580 | specific granule lumen | 2/50 | 62/19960 | 0.0105669229261904 | 0.042956838852122 | 0.0258732437780864 | CNN2/PTPN6 | 2 |
| GO | B_10_12 | GO:0101002 | ficolin-1-rich granule | 3/50 | 185/19960 | 0.0111579191103859 | 0.0443942739072799 | 0.026739022280208 | ARPC5/RHOA/TBC1D10C | 3 |
| GO | B_10_12 | GO:0005912 | adherens junction | 3/50 | 189/19960 | 0.0118189847004849 | 0.0460447945623057 | 0.0277331439243834 | ACTB/PDLIM1/PPP1CA | 3 |