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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0032271 | regulation of protein polymerization | 10/48 | 207/18986 | 8.70433239071615e-11 | 1.22905173356912e-08 | 9.53811580919527e-09 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 10 |
| GO | B_10_12 | GO:0045010 | actin nucleation | 7/48 | 58/18986 | 1.14050673277695e-10 | 1.46399591516459e-08 | 1.13614115676632e-08 | ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CORO1A | 7 |
| GO | B_10_12 | GO:0051258 | protein polymerization | 11/48 | 293/18986 | 1.33451120455677e-10 | 1.57027485069514e-08 | 1.21861944205579e-08 | ARPC2/ARPC3/ARPC4/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 11 |
| MeSH_gene2pubmed | B_10_12 | D019269 | Phosphatidylinositol 4,5-Diphosphate | 10/50 | 298/26076 | 2.24224733935135e-10 | 4.24474669395667e-08 | 3.18635148223613e-08 | ACTB/ACTR3/CAP1/CFL1/CSK/HCLS1/PFN1/RHOA/TWF2/VASP | 10 |
| MeSH_gene2pubmed | B_10_12 | D051356 | D051356 | 8/50 | 153/26076 | 5.09071439349238e-10 | 8.94874865884624e-08 | 6.71744643652566e-08 | ACTR3/ARPC2/ARPC3/ARPC4/CSK/HCLS1/PFN1/VASP | 8 |
| GO | B_10_12 | GO:0043254 | regulation of protein-containing complex assembly | 12/48 | 433/18986 | 5.6405288756812e-10 | 6.12648213266297e-08 | 4.75448628306407e-08 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/LCP1/PFN1/RHOA/TMSB4X/TWF2/VASP | 12 |
| KEGG | B_10_12 | hsa05132 | Salmonella infection | 11/31 | 251/8541 | 5.71548145901162e-10 | 8.28744811556685e-09 | 5.79068516241967e-09 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/MYL12A/PFN1/RHOA/RHOG | 11 |
| GO | B_10_12 | GO:0005884 | actin filament | 8/50 | 123/19960 | 7.14251712921846e-10 | 2.6713014063277e-08 | 1.608945963845e-08 | ACTB/ARPC3/CORO1A/LCP1/PDLIM1/RAC2/TPM3/TWF2 | 8 |
| reactome | B_10_12 | R-HSA-2029480 | Fcgamma receptor (FCGR) dependent phagocytosis | 8/43 | 86/11146 | 1.04931117921935e-09 | 5.71874592674546e-08 | 4.30769852521628e-08 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CFL1 | 8 |
| GO | B_10_12 | GO:0032535 | regulation of cellular component size | 11/48 | 361/18986 | 1.21512962795779e-09 | 1.22554502476886e-07 | 9.51090182484256e-08 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/RHOA/TMSB4X/TWF2/VASP | 11 |