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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D018374 | LLC-PK1 Cells | 3/50 | 163/26076 | 0.00378934758063939 | 0.0396833378551215 | 0.0297886002419805 | ACTR3/CFL1/VASP | 3 |
| reactome | B_10_12 | R-HSA-5627123 | RHO GTPases activate PAKs | 2/43 | 24/11146 | 0.00380210323319766 | 0.0303240916403813 | 0.0228419038913544 | CALM2/MYL12A | 2 |
| MeSH_gene2pubmed | B_10_12 | D009282 | D009282 | 2/50 | 48/26076 | 0.00384190207184488 | 0.0400632245712299 | 0.0300737651029784 | PFN1/TMSB4X | 2 |
| MeSH_gene2pubmed | B_10_12 | D026503 | Low Density Lipoprotein Receptor-Related Protein-1 | 3/50 | 165/26076 | 0.00392092089947589 | 0.0407147102683973 | 0.0305628078107048 | ACTB/ANXA6/ILK | 3 |
| MeSH_gene2pubmed | B_10_12 | D000622 | Aminolevulinic Acid | 2/50 | 49/26076 | 0.00400050007150693 | 0.0411934337907052 | 0.0309221652741452 | PDLIM1/VASP | 2 |
| MeSH_gene2pubmed | B_10_12 | D053499 | Plasma Membrane Calcium-Transporting ATPases | 2/50 | 49/26076 | 0.00400050007150693 | 0.0411934337907052 | 0.0309221652741452 | CALM2/PDLIM1 | 2 |
| MeSH_gene2pubmed | B_10_12 | D002464 | Cell Migration Inhibition | 3/50 | 167/26076 | 0.00405525416522531 | 0.0415832520859146 | 0.0312147853507475 | ILK/PFN1/RHOA | 3 |
| reactome | B_10_12 | R-HSA-6802957 | Oncogenic MAPK signaling | 3/43 | 84/11146 | 0.00410083918535061 | 0.0313512278629907 | 0.0236156037982934 | ACTB/CALM2/CSK | 3 |
| MeSH_gene2pubmed | B_10_12 | D001427 | Bacterial Toxins | 4/50 | 341/26076 | 0.00412184965944525 | 0.0419168264954329 | 0.0314651855255608 | ACTR3/RHOA/RHOG/VASP | 4 |
| MeSH_gene2pubmed | B_10_12 | D019893 | Ribosomal Protein S6 Kinases | 4/50 | 341/26076 | 0.00412184965944525 | 0.0419168264954329 | 0.0314651855255608 | ACTB/PPP1CA/PTPN6/RPS6KA1 | 4 |