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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_10_12 | R-HSA-5625900 | RHO GTPases activate CIT | 2/43 | 20/11146 | 0.00264310439836794 | 0.0240081982851755 | 0.0180843985151491 | MYL12A/RHOA | 2 |
| MeSH_gene2pubmed | B_10_12 | D016785 | Cryptosporidium parvum | 2/50 | 40/26076 | 0.00268272453678275 | 0.0307078376047551 | 0.0230510725192349 | ACTR3/VASP | 2 |
| GO | B_10_12 | GO:0072676 | lymphocyte migration | 3/48 | 110/18986 | 0.00270776828876074 | 0.0400009273704789 | 0.0310429144123069 | CORO1A/MYO1G/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D006487 | Hemostasis | 3/50 | 145/26076 | 0.00272633240595498 | 0.0310625187548852 | 0.0233173166298781 | ACTR3/RHOA/VASP | 3 |
| GO | B_10_12 | GO:0071674 | mononuclear cell migration | 4/48 | 231/18986 | 0.00273144240477659 | 0.0400009273704789 | 0.0310429144123069 | CNN2/CORO1A/MYO1G/RHOA | 4 |
| KEGG | B_10_12 | hsa05133 | Pertussis | 3/31 | 78/8541 | 0.00274008085675685 | 0.0144476990628997 | 0.01009503473542 | CALM2/CFL1/RHOA | 3 |
| GO | B_10_12 | GO:0002431 | Fc receptor mediated stimulatory signaling pathway | 2/48 | 31/18986 | 0.00277736560676218 | 0.0400009273704789 | 0.0310429144123069 | CSK/MYO1G | 2 |
| GO | B_10_12 | GO:1900027 | regulation of ruffle assembly | 2/48 | 31/18986 | 0.00277736560676218 | 0.0400009273704789 | 0.0310429144123069 | PFN1/RHOG | 2 |
| reactome | B_10_12 | R-HSA-1500931 | Cell-Cell communication | 4/43 | 153/11146 | 0.00277903631134581 | 0.0245606722651373 | 0.0185005546758156 | ACTB/ILK/PTPN6/VASP | 4 |
| MeSH_gene2pubmed | B_10_12 | D009634 | Noonan Syndrome | 2/50 | 41/26076 | 0.00281685542699183 | 0.0319459963402161 | 0.0239805058179513 | CSK/PTPN6 | 2 |