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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D020917 | Receptor, trkA | 4/50 | 265/26076 | 0.0016635650080917 | 0.0220385260042328 | 0.0165433876419208 | PTPN6/RGS19/RHOA/TPM3 | 4 |
| MeSH_gene2pubmed | B_10_12 | D017628 | Microglia | 5/50 | 450/26076 | 0.00167460559235739 | 0.0220385260042328 | 0.0165433876419208 | CORO1A/LCP1/PTPN6/RPS6KA1/UCP2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D034441 | Heterogeneous-Nuclear Ribonucleoproteins | 5/50 | 450/26076 | 0.00167460559235739 | 0.0220385260042328 | 0.0165433876419208 | ACTB/ARHGDIB/CSK/PTPN6/TPM3 | 5 |
| MeSH_gene2pubmed | B_10_12 | D002468 | Cell Physiological Phenomena | 3/50 | 123/26076 | 0.00170759089825795 | 0.0223530914926213 | 0.0167795186250991 | ILK/PTPN6/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D016315 | Proto-Oncogene Proteins c-abl | 4/50 | 268/26076 | 0.00173332845579126 | 0.0225468582833313 | 0.016924971144484 | CSK/PTPN6/RHOA/VASP | 4 |
| MeSH_gene2pubmed | B_10_12 | D016283 | Proto-Oncogene Proteins p21(ras) | 5/50 | 454/26076 | 0.00174071640545833 | 0.0225468582833313 | 0.016924971144484 | ILK/PTPN6/RAC2/RHOA/RPS6KA1 | 5 |
| MeSH_gene2pubmed | B_10_12 | D015852 | Eukaryotic Initiation Factor-2 | 4/50 | 269/26076 | 0.00175702835202258 | 0.0226389883472648 | 0.0169941292796894 | CNN2/CSK/PPP1CA/PTPN6 | 4 |
| KEGG | B_10_12 | hsa04720 | Long-term potentiation | 3/31 | 67/8541 | 0.00177255372575626 | 0.0102808116093863 | 0.00718350720438065 | CALM2/PPP1CA/RPS6KA1 | 3 |
| MeSH_gene2pubmed | B_10_12 | D054311 | nef Gene Products, Human Immunodeficiency Virus | 4/50 | 270/26076 | 0.00178095281971134 | 0.0228277337984875 | 0.0171358124922884 | ACTB/CALM2/CSK/RAC2 | 4 |
| GO | B_10_12 | GO:0051016 | barbed-end actin filament capping | 2/48 | 25/18986 | 0.00180924120326158 | 0.0300546891647688 | 0.0233240878339976 | CAPZB/TWF2 | 2 |