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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0051251 | positive regulation of lymphocyte activation | 5/48 | 336/18986 | 0.00154620306823296 | 0.026778284971463 | 0.0207814184100887 | ACTB/CORO1A/CSK/PTPN6/RHOA | 5 |
| MeSH_gene2pubmed | B_10_12 | D020663 | ras Guanine Nucleotide Exchange Factors | 3/50 | 119/26076 | 0.00155339340737364 | 0.0208901703581777 | 0.0156813657172317 | PTPN6/RAC2/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D044365 | GTP-Binding Protein alpha Subunits, G12-G13 | 3/50 | 119/26076 | 0.00155339340737364 | 0.0208901703581777 | 0.0156813657172317 | CFL1/RHOA/VASP | 3 |
| MeSH_gene2pubmed | B_10_12 | D054558 | Protein Tyrosine Phosphatases, Non-Receptor | 3/50 | 119/26076 | 0.00155339340737364 | 0.0208901703581777 | 0.0156813657172317 | CSK/MTMR14/PTPN6 | 3 |
| GO | B_10_12 | GO:0002009 | morphogenesis of an epithelium | 6/48 | 500/18986 | 0.0015551128666147 | 0.026778284971463 | 0.0207814184100887 | ACTB/ILK/PFN1/PPP1CA/RHOA/VASP | 6 |
| KEGG | B_10_12 | hsa05418 | Fluid shear stress and atherosclerosis | 4/31 | 141/8541 | 0.00158392477111344 | 0.00967027754995571 | 0.00675690899588557 | ACTB/CALM2/RAC2/RHOA | 4 |
| GO | B_10_12 | GO:0030901 | midbrain development | 3/48 | 92/18986 | 0.00162645685370503 | 0.0273399652075179 | 0.0212173130915656 | ACTB/CALM2/RHOA | 3 |
| GO | B_10_12 | GO:0032273 | positive regulation of protein polymerization | 3/48 | 92/18986 | 0.00162645685370503 | 0.0273399652075179 | 0.0212173130915656 | ARPC2/PFN1/VASP | 3 |
| GO | B_10_12 | GO:0099523 | presynaptic cytosol | 2/50 | 24/19960 | 0.00163859119673927 | 0.00928535011485585 | 0.00559263981024248 | ARL6IP5/CALM2 | 2 |
| MeSH_gene2pubmed | B_10_12 | D001773 | Blood Cells | 5/50 | 449/26076 | 0.00165837125959189 | 0.0220385260042328 | 0.0165433876419208 | ACTR3/CD53/HCLS1/PTPN6/RHOA | 5 |