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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0051279 | regulation of release of sequestered calcium ion into cytosol | 3/48 | 83/18986 | 0.0012090846393392 | 0.02445737971258 | 0.0189802685856536 | CALM2/CORO1A/PTPN6 | 3 |
| GO | B_10_12 | GO:1904062 | regulation of monoatomic cation transmembrane transport | 5/48 | 318/18986 | 0.0012124763313602 | 0.02445737971258 | 0.0189802685856536 | CALM2/CORO1A/PTPN6/TMSB4X/UCP2 | 5 |
| GO | B_10_12 | GO:0051495 | positive regulation of cytoskeleton organization | 4/48 | 186/18986 | 0.00123944414030166 | 0.0246492271282526 | 0.0191291527065089 | ARPC2/PFN1/RHOA/VASP | 4 |
| GO | B_10_12 | GO:0044305 | calyx of Held | 2/50 | 21/19960 | 0.0012527506564272 | 0.00755691525006088 | 0.00455158982131446 | ACTB/CALM2 | 2 |
| GO | B_10_12 | GO:0010288 | response to lead ion | 2/48 | 21/18986 | 0.00127465769576799 | 0.0246550228277315 | 0.0191336504873032 | PPP1CA/UCP2 | 2 |
| GO | B_10_12 | GO:0071800 | podosome assembly | 2/48 | 21/18986 | 0.00127465769576799 | 0.0246550228277315 | 0.0191336504873032 | LCP1/RHOA | 2 |
| MeSH_gene2pubmed | B_10_12 | D005727 | Ganglia, Spinal | 5/50 | 424/26076 | 0.0012889960763833 | 0.0188822579998768 | 0.0141741109903051 | ACTB/CFL1/ILK/RPS6KA1/UCP2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D054377 | Chemokine CXCL12 | 5/50 | 424/26076 | 0.0012889960763833 | 0.0188822579998768 | 0.0141741109903051 | ILK/PTPN6/RAC2/RHOA/RPS6KA1 | 5 |
| MeSH_gene2pubmed | B_10_12 | D051025 | bcl-Associated Death Protein | 4/50 | 249/26076 | 0.0013242070481464 | 0.0192235177597775 | 0.0144302802320022 | ILK/PPP1CA/PTPN6/RPS6KA1 | 4 |
| MeSH_gene2pubmed | B_10_12 | D007152 | Immunologic Capping | 3/50 | 113/26076 | 0.00133901938833802 | 0.0192235177597775 | 0.0144302802320022 | CD53/PFN1/PTPN6 | 3 |