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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:1903169 | regulation of calcium ion transmembrane transport | 4/48 | 179/18986 | 0.00107556648308387 | 0.0230106041532489 | 0.0178574913698614 | CALM2/CORO1A/PTPN6/UCP2 | 4 |
| MeSH_gene2pubmed | B_10_12 | D006019 | Glycolysis | 4/50 | 236/26076 | 0.00108678082426012 | 0.0166122211708332 | 0.0124700905300851 | CFL1/PPP1CA/PTPN6/UCP2 | 4 |
| GO | B_10_12 | GO:0051051 | negative regulation of transport | 6/48 | 467/18986 | 0.00109683854750277 | 0.0231154631205061 | 0.0179388676818599 | ARL6IP5/CALM2/CNN2/CORO1A/CSK/UCP2 | 6 |
| MeSH_gene2pubmed | B_10_12 | D020319 | Oligodeoxyribonucleotides, Antisense | 5/50 | 411/26076 | 0.00112303104468065 | 0.017060366672587 | 0.0128064943691654 | ACTR3/CSK/HCLS1/PTPN6/RHOA | 5 |
| MeSH_gene2pubmed | B_10_12 | D011947 | Receptors, Antigen, B-Cell | 5/50 | 412/26076 | 0.00113520019746479 | 0.0171394336562015 | 0.0128658466034918 | ARPC1B/CSK/HCLS1/PTPN6/RPS6KA1 | 5 |
| GO | B_10_12 | GO:0140238 | presynaptic endocytosis | 3/48 | 82/18986 | 0.00116744539005031 | 0.0242416601581035 | 0.0188128583752689 | ACTB/ARPC3/CALM2 | 3 |
| MeSH_gene2pubmed | B_10_12 | D014638 | Vanadates | 5/50 | 415/26076 | 0.00117229617117337 | 0.0175136041084045 | 0.0131467205073889 | CSK/HCLS1/ILK/PTPN6/RHOA | 5 |
| MeSH_gene2pubmed | B_10_12 | D018994 | Myosin Light Chains | 4/50 | 241/26076 | 0.00117421563506166 | 0.0175136041084045 | 0.0131467205073889 | CFL1/ILK/MYL12A/RHOA | 4 |
| GO | B_10_12 | GO:0001726 | ruffle | 4/50 | 185/19960 | 0.00117950387225346 | 0.00735224080371321 | 0.00442831278354806 | CFL1/LCP1/MTMR14/RHOA | 4 |
| MeSH_gene2pubmed | B_10_12 | D052250 | Nitric Oxide Synthase Type III | 5/50 | 417/26076 | 0.00119752216762724 | 0.017753626834522 | 0.0133268953975004 | ACTB/ILK/RHOA/UCP2/VASP | 5 |