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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D016957 | Burkholderia pseudomallei | 2/50 | 22/26076 | 0.0008121924277565 | 0.0133253704313918 | 0.0100027909523696 | ACTR3/VASP | 2 |
| MeSH_gene2pubmed | B_10_12 | D017314 | Annexin A4 | 2/50 | 22/26076 | 0.0008121924277565 | 0.0133253704313918 | 0.0100027909523696 | ANXA6/PFN1 | 2 |
| MeSH_gene2pubmed | B_10_12 | D001425 | Bacterial Outer Membrane Proteins | 4/50 | 219/26076 | 0.00082368899334717 | 0.0134244941233603 | 0.0100771989078027 | ILK/PTPN6/RHOA/RPS6KA1 | 4 |
| MeSH_gene2pubmed | B_10_12 | D018179 | Receptors, Thrombin | 4/50 | 220/26076 | 0.00083776591639455 | 0.0135009939488173 | 0.0101346240852774 | ACTR3/CSK/PTPN6/RHOA | 4 |
| MeSH_gene2pubmed | B_10_12 | D010703 | Phorbol Esters | 5/50 | 385/26076 | 0.00083935476398579 | 0.0135009939488173 | 0.0101346240852774 | CORO1A/ILK/PTPN6/RHOA/RPS6KA1 | 5 |
| GO | B_10_12 | GO:0042060 | wound healing | 6/48 | 444/18986 | 0.0008448690770018 | 0.0190458900173136 | 0.0147806556642489 | ACTB/CNN2/ILK/MYL12A/PTPN6/RHOA | 6 |
| MeSH_gene2pubmed | B_10_12 | D032446 | Myoblasts | 5/50 | 386/26076 | 0.00084915217560474 | 0.0135698928841772 | 0.0101863435966257 | ACTB/ACTR3/ARPC4/ARPC5/ILK | 5 |
| GO | B_10_12 | GO:0061572 | actin filament bundle organization | 4/48 | 168/18986 | 0.00084978121182065 | 0.0190458900173136 | 0.0147806556642489 | LCP1/PDLIM1/PFN1/RHOA | 4 |
| KEGG | B_10_12 | hsa04722 | Neurotrophin signaling pathway | 4/31 | 120/8541 | 0.00086966782666867 | 0.00560452599408702 | 0.00391604810839111 | ARHGDIB/CALM2/RHOA/RPS6KA1 | 4 |
| MeSH_gene2pubmed | B_10_12 | D054461 | Lim Kinases | 3/50 | 98/26076 | 0.0008875531136878 | 0.0140920529857141 | 0.0105783070595728 | CFL1/PDLIM1/RHOA | 3 |