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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D044463 | Receptor, PAR-1 | 4/50 | 215/26076 | 0.00076905090229008 | 0.012963248428328 | 0.00973096130871735 | CSK/HCLS1/PTPN6/RHOA | 4 |
| reactome | B_10_12 | R-HSA-6802946 | Signaling by moderate kinase activity BRAF mutants | 3/43 | 47/11146 | 0.00077052191446435 | 0.00881945303833123 | 0.00664333497817321 | ACTB/CALM2/CSK | 3 |
| reactome | B_10_12 | R-HSA-6802949 | Signaling by RAS mutants | 3/43 | 47/11146 | 0.00077052191446435 | 0.00881945303833123 | 0.00664333497817321 | ACTB/CALM2/CSK | 3 |
| reactome | B_10_12 | R-HSA-6802955 | Paradoxical activation of RAF signaling by kinase inactive BRAF | 3/43 | 47/11146 | 0.00077052191446435 | 0.00881945303833123 | 0.00664333497817321 | ACTB/CALM2/CSK | 3 |
| reactome | B_10_12 | R-HSA-9020591 | Interleukin-12 signaling | 3/43 | 47/11146 | 0.00077052191446435 | 0.00881945303833123 | 0.00664333497817321 | CFL1/CNN2/LCP1 | 3 |
| reactome | B_10_12 | R-HSA-9649948 | Signaling downstream of RAS mutants | 3/43 | 47/11146 | 0.00077052191446435 | 0.00881945303833123 | 0.00664333497817321 | ACTB/CALM2/CSK | 3 |
| GO | B_10_12 | GO:0051017 | actin filament bundle assembly | 4/48 | 164/18986 | 0.00077672394919279 | 0.0179792494468889 | 0.013952884057113 | LCP1/PDLIM1/PFN1/RHOA | 4 |
| reactome | B_10_12 | R-HSA-5625970 | RHO GTPases activate KTN1 | 2/43 | 11/11146 | 0.00078215332755842 | 0.00881945303833123 | 0.00664333497817321 | RHOA/RHOG | 2 |
| MeSH_gene2pubmed | B_10_12 | D017405 | Herpes Simplex Virus Protein Vmw65 | 4/50 | 216/26076 | 0.00078246224528719 | 0.0130995890180394 | 0.00983330641230953 | ACTB/ARPC2/CAP1/PPP1CA | 4 |
| MeSH_gene2pubmed | B_10_12 | D014783 | Viscosity | 3/50 | 95/26076 | 0.00081098402849192 | 0.0133253704313918 | 0.0100027909523696 | ACTB/PFN1/TMSB4X | 3 |