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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D022502 | Stress Fibers | 11/50 | 246/26076 | 1.13730347821845e-12 | 3.49862982486952e-10 | 2.62627316351762e-10 | ACTB/CFL1/ILK/MYL12A/PDLIM1/PFN1/PPP1CA/RAC2/RHOA/TPM3/VASP | 11 |
| GO | B_10_12 | GO:0030833 | regulation of actin filament polymerization | 10/48 | 135/18986 | 1.22532760880522e-12 | 4.32540645908243e-10 | 3.35675273885851e-10 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 10 |
| reactome | B_10_12 | R-HSA-2682334 | EPH-Ephrin signaling | 10/43 | 92/11146 | 1.36364120611218e-12 | 2.22955337199341e-10 | 1.67943180121184e-10 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CFL1/MYL12A/RHOA | 10 |
| MeSH_gene2pubmed | B_10_12 | D051345 | Destrin | 7/50 | 42/26076 | 1.57633258002566e-12 | 4.31039386604794e-10 | 3.23563003268425e-10 | ACTB/ACTR3/CAP1/CFL1/PFN1/RHOA/VASP | 7 |
| GO | B_10_12 | GO:0008064 | regulation of actin polymerization or depolymerization | 10/48 | 153/18986 | 4.31861591116972e-12 | 1.21957713331433e-09 | 9.46458771268985e-10 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 10 |
| GO | B_10_12 | GO:0030832 | regulation of actin filament length | 10/48 | 156/18986 | 5.24629813733113e-12 | 1.23462882831859e-09 | 9.58139712449423e-10 | ARPC2/ARPC3/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 10 |
| KEGG | B_10_12 | hsa04530 | Tight junction | 11/31 | 170/8541 | 8.42781524020237e-12 | 2.44406641965869e-10 | 1.7077415091989e-10 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/HCLS1/MYL12A/RHOA/VASP | 11 |
| reactome | B_10_12 | R-HSA-195258 | RHO GTPase Effectors | 14/43 | 326/11146 | 9.25829938284162e-12 | 1.00915463272974e-09 | 7.60155107222785e-10 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CALM2/CFL1/MYL12A/PFN1/RAC2/RHOA/RHOG | 14 |
| MeSH_gene2pubmed | B_10_12 | D008089 | D008089 | 9/50 | 148/26076 | 9.82454290402557e-12 | 2.38217459970959e-09 | 1.7881975330911e-09 | ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/PFN1/UCP2/VASP | 9 |
| MeSH_gene2pubmed | B_10_12 | D022001 | Focal Adhesions | 12/50 | 401/26076 | 1.06476719206849e-11 | 2.38217459970959e-09 | 1.7881975330911e-09 | ACTB/ACTR3/ANXA6/CFL1/CSK/ILK/LCP1/PFN1/PPP1CA/RHOA/RPS6KA1/VASP | 12 |