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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0150034 | distal axon | 5/50 | 281/19960 | 0.00067366636655289 | 0.00449912894804966 | 0.00270986094816388 | ACTB/ARPC3/CALM2/CFL1/TWF2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D013049 | Spectrin | 4/50 | 210/26076 | 0.00070442518097538 | 0.0122949671658186 | 0.00922931088176033 | ACTB/CSK/PFN1/VASP | 4 |
| GO | B_10_12 | GO:0048857 | neural nucleus development | 3/48 | 69/18986 | 0.00070675675183497 | 0.0171141843222165 | 0.0132815460559321 | ACTB/CALM2/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D054460 | rho-Associated Kinases | 5/50 | 371/26076 | 0.00071088023121204 | 0.0123158581532236 | 0.00924499286080002 | CFL1/ILK/PFN1/RHOA/VASP | 5 |
| GO | B_10_12 | GO:0007159 | leukocyte cell-cell adhesion | 6/48 | 430/18986 | 0.00071511110128241 | 0.0171141843222165 | 0.0132815460559321 | ACTB/CORO1A/CSK/PTPN6/RAC2/RHOA | 6 |
| MeSH_gene2pubmed | B_10_12 | D027602 | Serum Response Element | 3/50 | 91/26076 | 0.00071563092885452 | 0.0123158581532236 | 0.00924499286080002 | CSK/RHOA/VASP | 3 |
| MeSH_gene2pubmed | B_10_12 | D018801 | CD2 Antigens | 4/50 | 212/26076 | 0.00072979378292007 | 0.0124723784705994 | 0.00936248603088258 | CD53/HCLS1/PTPN6/SHKBP1 | 4 |
| GO | B_10_12 | GO:1903039 | positive regulation of leukocyte cell-cell adhesion | 5/48 | 284/18986 | 0.0007315925590795 | 0.0172168115570044 | 0.0133611904210836 | ACTB/CORO1A/CSK/PTPN6/RHOA | 5 |
| MeSH_gene2pubmed | B_10_12 | D015247 | Deoxyribonuclease HindIII | 3/50 | 92/26076 | 0.00073875858739036 | 0.0125385164383978 | 0.00941213300087176 | CALM2/PFN1/TMSB4X | 3 |
| KEGG | B_10_12 | hsa05205 | Proteoglycans in cancer | 5/31 | 204/8541 | 0.00075809359756608 | 0.00517287395986268 | 0.00361444006269897 | ACTB/HCLS1/PPP1CA/PTPN6/RHOA | 5 |