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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D050719 | Crk-Associated Substrate Protein | 4/50 | 171/26076 | 0.00032498973437053 | 0.00666499780238238 | 0.00500313143702008 | CFL1/CSK/PTPN6/RHOA | 4 |
| GO | B_10_12 | GO:0042989 | sequestering of actin monomers | 2/48 | 11/18986 | 0.00033926785205316 | 0.0100814962310328 | 0.0078237942273037 | TMSB4X/TWF2 | 2 |
| GO | B_10_12 | GO:0051282 | regulation of sequestering of calcium ion | 4/48 | 132/18986 | 0.0003427137528963 | 0.0100814962310328 | 0.0078237942273037 | ANXA6/CALM2/CORO1A/PTPN6 | 4 |
| MeSH_gene2pubmed | B_10_12 | D020797 | Receptor, Platelet-Derived Growth Factor beta | 4/50 | 174/26076 | 0.00034715006567565 | 0.00706063067460979 | 0.00530011627021116 | CSK/PTPN6/RHOA/TPM3 | 4 |
| MeSH_gene2pubmed | B_10_12 | D010010 | Osteoclasts | 6/50 | 495/26076 | 0.00035547738249745 | 0.00717073637972315 | 0.00538276795757571 | ACTB/ACTR3/CNN2/CSK/PFN1/PTPN6 | 6 |
| MeSH_gene2pubmed | B_10_12 | D011137 | Polystyrenes | 3/50 | 72/26076 | 0.0003604245147306 | 0.00721142057521966 | 0.00541330785924015 | ACTR3/ILK/VASP | 3 |
| GO | B_10_12 | GO:0051208 | sequestering of calcium ion | 4/48 | 136/18986 | 0.00038386029710093 | 0.0110614436633984 | 0.00858428720262243 | ANXA6/CALM2/CORO1A/PTPN6 | 4 |
| MeSH_gene2pubmed | B_10_12 | D055504 | Insulin Receptor Substrate Proteins | 5/50 | 328/26076 | 0.00040693404550967 | 0.00807632811289759 | 0.0060625572994013 | CSK/ILK/PTPN6/RPS6KA1/UCP2 | 5 |
| reactome | B_10_12 | R-HSA-8950505 | Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation | 3/43 | 38/11146 | 0.00041067299022122 | 0.00610409399101546 | 0.00459796553644815 | CFL1/CNN2/LCP1 | 3 |
| GO | B_10_12 | GO:0007266 | Rho protein signal transduction | 4/48 | 139/18986 | 0.00041695664787899 | 0.0116534551616557 | 0.00904372060778555 | ARHGDIB/CFL1/RHOA/RHOG | 4 |