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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D047629 | Estrogen Receptor beta | 5/50 | 283/26076 | 0.000206537670285 | 0.00513423440981215 | 0.00385405222062932 | ACTB/CALM2/PTPN6/RHOA/TADA3 | 5 |
| GO | B_10_12 | GO:0034762 | regulation of transmembrane transport | 7/48 | 487/18986 | 0.0002072991544711 | 0.00750529246444116 | 0.00582451875315584 | ACTB/ARL6IP5/CALM2/CORO1A/PTPN6/TMSB4X/UCP2 | 7 |
| GO | B_10_12 | GO:0021762 | substantia nigra development | 3/48 | 46/18986 | 0.00021328470393512 | 0.00752895004891001 | 0.00584287833674916 | ACTB/CALM2/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D051076 | Proto-Oncogene Proteins c-fyn | 6/50 | 452/26076 | 0.00021867138492676 | 0.00537882073613711 | 0.00403765281204501 | ACTB/CSK/HCLS1/PTPN6/RHOA/VASP | 6 |
| MeSH_gene2pubmed | B_10_12 | D041701 | Swiss 3T3 Cells | 3/50 | 61/26076 | 0.00022074802696052 | 0.00537882073613711 | 0.00403765281204501 | ACTR3/RHOA/VASP | 3 |
| GO | B_10_12 | GO:0051235 | maintenance of location | 6/48 | 345/18986 | 0.00022225907008351 | 0.00765438553555897 | 0.00594022315678909 | ANXA6/CALM2/CORO1A/PTPN6/TMSB4X/TWF2 | 6 |
| MeSH_gene2pubmed | B_10_12 | D015676 | Osteonectin | 4/50 | 155/26076 | 0.00022355573086457 | 0.00539382993782084 | 0.00404891958377021 | ANXA6/ILK/PTPN6/RHOA | 4 |
| GO | B_10_12 | GO:0030017 | sarcomere | 5/50 | 222/19960 | 0.00022937447865438 | 0.00158863064845812 | 0.00095684480374342 | CALM2/CAPZB/ILK/PDLIM1/TPM3 | 5 |
| MeSH_gene2pubmed | B_10_12 | D007526 | Isoelectric Point | 5/50 | 291/26076 | 0.00023494839029812 | 0.00561366979149216 | 0.00421394404673699 | ACTB/ARHGDIB/CNN2/PFN1/TPM3 | 5 |
| MeSH_gene2pubmed | B_10_12 | D020123 | Sirolimus | 6/50 | 460/26076 | 0.0002402866666464 | 0.00568601429439221 | 0.00426824999963999 | ILK/PTPN6/RHOA/RPS6KA1/TMSB4X/VASP | 6 |