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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0030863 | cortical cytoskeleton | 4/50 | 109/19960 | 0.00015970367011705 | 0.00120866596571957 | 0.00072798907026171 | ACTB/CAP1/CAPZB/CORO1A | 4 |
| GO | B_10_12 | GO:0099563 | modification of synaptic structure | 3/48 | 42/18986 | 0.00016244686894453 | 0.00603618365657064 | 0.00468440971111528 | CAP1/PFN1/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D043802 | GTP-Binding Protein alpha Subunits, Gq-G11 | 5/50 | 269/26076 | 0.00016321033046649 | 0.00431893143309716 | 0.00324203882250926 | CFL1/CSK/HCLS1/RGS19/RHOA | 5 |
| GO | B_10_12 | GO:0060205 | cytoplasmic vesicle lumen | 6/50 | 329/19960 | 0.00016530691213978 | 0.00120866596571957 | 0.00072798907026171 | ARPC5/CAP1/CNN2/PTPN6/TMSB4X/TRAPPC1 | 6 |
| GO | B_10_12 | GO:0031983 | vesicle lumen | 6/50 | 330/19960 | 0.00016804981341555 | 0.00120866596571957 | 0.00072798907026171 | ARPC5/CAP1/CNN2/PTPN6/TMSB4X/TRAPPC1 | 6 |
| MeSH_gene2pubmed | B_10_12 | D015550 | Cell Degranulation | 5/50 | 271/26076 | 0.0001689298631428 | 0.0044227275871749 | 0.00331995419726339 | HCLS1/PFN1/PTPN6/RHOA/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D043263 | Myosin-Light-Chain Phosphatase | 3/50 | 57/26076 | 0.00018043949228354 | 0.00467433253168214 | 0.00350882336795148 | ILK/PPP1CA/RHOA | 3 |
| MeSH_gene2pubmed | B_10_12 | D055765 | Shc Signaling Adaptor Proteins | 5/50 | 279/26076 | 0.00019335654465501 | 0.00495677558745823 | 0.0037208414020784 | CSK/HCLS1/PTPN6/RAC2/RHOA | 5 |
| MeSH_gene2pubmed | B_10_12 | D017368 | Protein Prenylation | 5/50 | 281/26076 | 0.00019986412977743 | 0.00507077962249753 | 0.00380641940053601 | ACTR3/ARHGDIB/RAC2/RHOA/RPS6KA1 | 5 |
| MeSH_gene2pubmed | B_10_12 | D019319 | Okadaic Acid | 6/50 | 446/26076 | 0.00020349258147384 | 0.00511015554088916 | 0.00383597723401291 | ARPC2/CFL1/HCLS1/ILK/PPP1CA/PTPN6 | 6 |