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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_10_12 | WP3680 | Physico chemical features and toxicity associated pathways | 4/35 | 66/8836 | 0.00012490892121359 | 0.0030394504161975 | 0.00256391996175276 | ACTR3/PFN1/RHOA/TMSB4X | 4 |
| reactome | B_10_12 | R-HSA-114608 | Platelet degranulation | 5/43 | 129/11146 | 0.00012998912861884 | 0.00212532225291811 | 0.00160091874193735 | CALM2/CAP1/CFL1/PFN1/TMSB4X | 5 |
| MeSH_gene2pubmed | B_10_12 | D006162 | Guanylate Cyclase | 5/50 | 262/26076 | 0.00014435117518393 | 0.00397161725321247 | 0.00298132478427164 | CFL1/ILK/RHOA/RPS6KA1/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D005895 | Gizzard, Avian | 3/50 | 53/26076 | 0.00014524402795169 | 0.00397161725321247 | 0.00298132478427164 | ACTB/TPM3/VASP | 3 |
| GO | B_10_12 | GO:0031334 | positive regulation of protein-containing complex assembly | 5/48 | 200/18986 | 0.00014623539371538 | 0.00558065880881402 | 0.00433089743549679 | ARPC2/LCP1/PFN1/RHOA/VASP | 5 |
| GO | B_10_12 | GO:0034774 | secretory granule lumen | 6/50 | 324/19960 | 0.00015211996563663 | 0.00120866596571957 | 0.00072798907026171 | ARPC5/CAP1/CNN2/PTPN6/TMSB4X/TRAPPC1 | 6 |
| MeSH_gene2pubmed | B_10_12 | D039661 | Integrin beta3 | 5/50 | 266/26076 | 0.0001549103637623 | 0.00418938906834114 | 0.0031447968583326 | ACTR3/CSK/ILK/RPS6KA1/VASP | 5 |
| reactome | B_10_12 | R-HSA-76005 | Response to elevated platelet cytosolic Ca2+ | 5/43 | 134/11146 | 0.0001554512315883 | 0.00242059774901791 | 0.0018233377539681 | CALM2/CAP1/CFL1/PFN1/TMSB4X | 5 |
| MeSH_gene2pubmed | B_10_12 | D019703 | Calcineurin | 6/50 | 425/26076 | 0.00015680250723169 | 0.00419446706844788 | 0.00314860869784471 | CFL1/ILK/PPP1CA/PTPN6/RAC2/TBC1D10C | 6 |
| GO | B_10_12 | GO:0005903 | brush border | 4/50 | 109/19960 | 0.00015970367011705 | 0.00120866596571957 | 0.00072798907026171 | ACTB/ACTR3/CAPZB/RGS19 | 4 |