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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_10_12 | hsa05100 | Bacterial invasion of epithelial cells | 11/31 | 78/8541 | 1.29779307809839e-15 | 1.50543997059414e-13 | 1.05189544224817e-13 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/HCLS1/ILK/RHOA/RHOG | 11 |
| MeSH_gene2pubmed | B_10_12 | D051376 | Actin-Related Protein 2-3 Complex | 9/50 | 63/26076 | 3.58090683171352e-15 | 1.53999300566289e-12 | 1.15600749585678e-12 | ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CORO1A/HCLS1/VASP | 9 |
| MeSH_gene2pubmed | B_10_12 | D000048 | Acanthamoeba | 8/50 | 37/26076 | 3.75455426004767e-15 | 1.53999300566289e-12 | 1.15600749585678e-12 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/PFN1 | 8 |
| GO | B_10_12 | GO:0031252 | cell leading edge | 16/50 | 433/19960 | 4.5810457077685e-15 | 2.14163886838177e-13 | 1.28992602824008e-13 | ACTB/ACTR3/ARPC2/ARPC3/ARPC5/CAPZB/CFL1/CORO1A/ILK/LCP1/MTMR14/MYO1G/RAC2/RHOA/TWF2/VASP | 16 |
| KEGG | B_10_12 | hsa04810 | Regulation of actin cytoskeleton | 14/31 | 232/8541 | 1.41849774625789e-14 | 8.22728692829575e-13 | 5.74864876115039e-13 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CFL1/MYL12A/PFN1/PPP1CA/RAC2/RHOA/TMSB4X | 14 |
| reactome | B_10_12 | R-HSA-3928662 | EPHB-mediated forward signaling | 9/43 | 42/11146 | 3.14830917052468e-14 | 1.02949709876157e-11 | 7.75478258845025e-12 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CFL1/RHOA | 9 |
| GO | B_10_12 | GO:0008154 | actin polymerization or depolymerization | 12/48 | 196/18986 | 5.25604633069241e-14 | 3.71076870946884e-11 | 2.87976012118463e-11 | ARPC2/ARPC3/ARPC4/ARPC5/CAPZB/CFL1/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 12 |
| MeSH_gene2pubmed | B_10_12 | D051339 | Actin Depolymerizing Factors | 10/50 | 147/26076 | 2.01408862717964e-13 | 7.08096015927013e-11 | 5.31537675293274e-11 | ACTB/ACTR3/ARPC2/ARPC4/CAP1/CFL1/ILK/PFN1/RHOA/VASP | 10 |
| GO | B_10_12 | GO:0030041 | actin filament polymerization | 11/48 | 167/18986 | 2.98342339024241e-13 | 1.40419794234076e-10 | 1.08973464885697e-10 | ARPC2/ARPC3/ARPC4/ARPC5/CAPZB/CORO1A/HCLS1/PFN1/TMSB4X/TWF2/VASP | 11 |
| KEGG | B_10_12 | hsa05135 | Yersinia infection | 11/31 | 138/8541 | 8.42535522967689e-13 | 3.25780402214173e-11 | 2.27632404450919e-11 | ACTB/ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/RAC2/RHOA/RHOG/RPS6KA1 | 11 |