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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D015689 | Oncogene Protein p21(ras) | 5/50 | 234/26076 | 8.50050669541168e-05 | 0.00246114670322449 | 0.00184747854494706 | HCLS1/PTPN6/RAC2/RHOA/RPS6KA1 | 5 |
| MeSH_gene2pubmed | B_10_12 | D010974 | Platelet Aggregation | 6/50 | 382/26076 | 8.76404186430045e-05 | 0.00250794267767947 | 0.00188260630010371 | ACTB/CFL1/ILK/PTPN6/RHOA/VASP | 6 |
| hallmark | B_10_12 | HALLMARK_APICAL_JUNCTION | HALLMARK_APICAL_JUNCTION | 7/25 | 200/4384 | 8.82305675638041e-05 | 0.00083819039185613 | 0.00074299425316887 | ACTB/ARPC2/CAP1/CNN2/PFN1/RAC2/VASP | 7 |
| GO | B_10_12 | GO:0031256 | leading edge membrane | 5/50 | 182/19960 | 9.06483310160002e-05 | 0.00083502805011004 | 0.00050294399865902 | CFL1/LCP1/MYO1G/RHOA/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D016333 | HIV Protease | 4/50 | 123/26076 | 9.17875760132644e-05 | 0.0025964278686051 | 0.00194902838358474 | ACTB/HCLS1/LCP1/TPM3 | 4 |
| GO | B_10_12 | GO:0099010 | modification of postsynaptic structure | 3/48 | 35/18986 | 9.37722036159097e-05 | 0.00378303861444756 | 0.00293584553275675 | CAP1/PFN1/RHOA | 3 |
| GO | B_10_12 | GO:0032432 | actin filament bundle | 4/50 | 95/19960 | 9.37732034882941e-05 | 0.00083502805011004 | 0.00050294399865902 | CNN2/LCP1/PDLIM1/TPM3 | 4 |
| KEGG | B_10_12 | hsa04015 | Rap1 signaling pathway | 6/31 | 212/8541 | 9.54489911771456e-05 | 0.00079086306975349 | 0.00055259942260452 | ACTB/CALM2/PFN1/RAC2/RHOA/VASP | 6 |
| MeSH_gene2pubmed | B_10_12 | D003712 | Dendrites | 6/50 | 404/26076 | 0.00011904525587701 | 0.00332920880356067 | 0.00249909598162877 | ACTR3/CSK/ILK/PFN1/RHOA/TPM3 | 6 |
| GO | B_10_12 | GO:0034109 | homotypic cell-cell adhesion | 4/48 | 101/18986 | 0.00012263768530531 | 0.00481012254586384 | 0.00373291901762656 | ACTB/ILK/MYL12A/PTPN6 | 4 |