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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D051338 | Cofilin 1 | 3/50 | 36/26076 | 4.52962235366008e-05 | 0.00142915392466121 | 0.00107280529428791 | CAP1/CFL1/PFN1 | 3 |
| GO | B_10_12 | GO:0001891 | phagocytic cup | 3/50 | 28/19960 | 4.636162706184e-05 | 0.00061925887575457 | 0.00037298451846743 | CORO1A/LCP1/MYO1G | 3 |
| GO | B_10_12 | GO:0032272 | negative regulation of protein polymerization | 4/48 | 80/18986 | 4.93878497199203e-05 | 0.00217923886889148 | 0.00169120893284332 | CAPZB/PFN1/TMSB4X/TWF2 | 4 |
| MeSH_gene2pubmed | B_10_12 | D020536 | Enzyme Activators | 5/50 | 211/26076 | 5.21282603173005e-05 | 0.00162389428659338 | 0.00121898863233661 | ACTR3/CSK/RAC2/RHOA/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D053670 | Syndecan-3 | 3/50 | 38/26076 | 5.3373738451779e-05 | 0.00164190962912285 | 0.00123251198661674 | ACTB/ANXA6/CSK | 3 |
| KEGG | B_10_12 | hsa04670 | Leukocyte transendothelial migration | 5/31 | 116/8541 | 5.43067326835583e-05 | 0.00052496508260773 | 0.00036680863303806 | ACTB/MYL12A/RAC2/RHOA/VASP | 5 |
| GO | B_10_12 | GO:0070820 | tertiary granule | 5/50 | 164/19960 | 5.5364084192155e-05 | 0.00066823611087261 | 0.00040248389453064 | CD53/CNN2/PTPN6/RHOA/TBC1D10C | 5 |
| reactome | B_10_12 | R-HSA-5627117 | RHO GTPases Activate ROCKs | 3/43 | 20/11146 | 5.82478300315687e-05 | 0.00105816891224016 | 0.00079707556885304 | CFL1/MYL12A/RHOA | 3 |
| GO | B_10_12 | GO:0001725 | stress fiber | 4/50 | 85/19960 | 6.07487373520557e-05 | 0.00066823611087261 | 0.00040248389453064 | CNN2/LCP1/PDLIM1/TPM3 | 4 |
| GO | B_10_12 | GO:0097517 | contractile actin filament bundle | 4/50 | 85/19960 | 6.07487373520557e-05 | 0.00066823611087261 | 0.00040248389453064 | CNN2/LCP1/PDLIM1/TPM3 | 4 |