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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0043292 | contractile muscle fiber | 6/50 | 253/19960 | 3.89298653916087e-05 | 0.00055999114063314 | 0.00033728709286656 | CALM2/CAPZB/ILK/PDLIM1/TPM3/TWF2 | 6 |
| MeSH_gene2pubmed | B_10_12 | D020932 | Nerve Growth Factor | 7/50 | 492/26076 | 4.0396938639459e-05 | 0.0013807898054404 | 0.00103650039930191 | ILK/PPP1CA/RGS19/RHOA/RHOG/RPS6KA1/UCP2 | 7 |
| MeSH_gene2pubmed | B_10_12 | D008087 | D008087 | 3/50 | 35/26076 | 4.15776418360418e-05 | 0.00140167913093834 | 0.00105218113081836 | ACTR3/ARHGDIB/VASP | 3 |
| reactome | B_10_12 | R-HSA-446353 | Cell-extracellular matrix interactions | 3/43 | 18/11146 | 4.19182085562977e-05 | 0.00082425093729535 | 0.00062087467995208 | ACTB/ILK/VASP | 3 |
| GO | B_10_12 | GO:0070527 | platelet aggregation | 4/48 | 77/18986 | 4.24939408009292e-05 | 0.00193553046486813 | 0.00150207783951672 | ACTB/ILK/MYL12A/PTPN6 | 4 |
| reactome | B_10_12 | R-HSA-9012999 | RHO GTPase cycle | 9/43 | 449/11146 | 4.28509661590859e-05 | 0.00082425093729535 | 0.00062087467995208 | ACTB/ARHGDIB/CAPZB/CSK/RAC2/RHOA/RHOG/SHKBP1/TPM3 | 9 |
| MeSH_gene2pubmed | B_10_12 | D000205 | D000205 | 4/50 | 102/26076 | 4.42539113657458e-05 | 0.00142915392466121 | 0.00107280529428791 | HCLS1/PFN1/RHOA/TPM3 | 4 |
| MeSH_gene2pubmed | B_10_12 | D017319 | Photosensitizing Agents | 4/50 | 102/26076 | 4.42539113657458e-05 | 0.00142915392466121 | 0.00107280529428791 | HCLS1/PDLIM1/RHOA/VASP | 4 |
| MeSH_gene2pubmed | B_10_12 | D022005 | Adherens Junctions | 5/50 | 204/26076 | 4.44080996377339e-05 | 0.00142915392466121 | 0.00107280529428791 | ACTB/ACTR3/ILK/RHOA/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D003457 | Cryptosporidiosis | 3/50 | 36/26076 | 4.52962235366008e-05 | 0.00142915392466121 | 0.00107280529428791 | ACTR3/TPM3/VASP | 3 |