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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D017869 | Cyclic GMP-Dependent Protein Kinases | 5/50 | 182/26076 | 2.57502465154025e-05 | 0.00093974834620057 | 0.0007054292639201 | ILK/PFN1/RHOA/RPS6KA1/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D024461 | Myosin Type I | 3/50 | 30/26076 | 2.59662281762044e-05 | 0.00093974834620057 | 0.0007054292639201 | ACTB/ACTR3/PFN1 | 3 |
| GO | B_10_12 | GO:0045296 | cadherin binding | 7/50 | 334/18737 | 2.7772462337257e-05 | 0.00099425415167379 | 0.00067238593027043 | CAPZB/CNN2/PDLIM1/PFN1/PPP1CA/TWF2/VASP | 7 |
| MeSH_gene2pubmed | B_10_12 | D019086 | Bridged Bicyclo Compounds, Heterocyclic | 5/50 | 186/26076 | 2.85768743947638e-05 | 0.00101924185341324 | 0.00076510167143875 | ACTB/CFL1/FDFT1/RHOA/TPM3 | 5 |
| GO | B_10_12 | GO:0031253 | cell projection membrane | 7/50 | 358/19960 | 2.89739988130979e-05 | 0.00048417495929857 | 0.00029162240723303 | ARPC2/CFL1/LCP1/RHOA/SYTL1/TBC1D10C/VASP | 7 |
| MeSH_gene2pubmed | B_10_12 | D020703 | ras GTPase-Activating Proteins | 6/50 | 313/26076 | 2.90531137120554e-05 | 0.00102142446921955 | 0.00076674006864146 | ACTR3/ANXA6/CSK/PTPN6/RHOA/TBC1D10C | 6 |
| GO | B_10_12 | GO:0001667 | ameboidal-type cell migration | 6/48 | 241/18986 | 3.08765605377797e-05 | 0.00145325678264483 | 0.00112780700069574 | ARHGDIB/CAP1/CORO1A/ILK/PDLIM1/PFN1 | 6 |
| GO | B_10_12 | GO:0030016 | myofibril | 6/50 | 243/19960 | 3.10700508640799e-05 | 0.00048417495929857 | 0.00029162240723303 | CALM2/CAPZB/ILK/PDLIM1/TPM3/TWF2 | 6 |
| WikiPathways | B_10_12 | WP3888 | VEGFA VEGFR2 signaling | 9/35 | 432/8836 | 3.32543217953424e-05 | 0.00097102619642399 | 0.00081910645264317 | CAPZB/CFL1/CSK/PFN1/PPP1CA/PTPN6/RHOA/TMSB4X/TPM3 | 9 |
| MeSH_gene2pubmed | B_10_12 | D020743 | rhoB GTP-Binding Protein | 4/50 | 95/26076 | 3.34811059560239e-05 | 0.00116052115151796 | 0.00087115405415599 | CFL1/ILK/RHOA/RHOG | 4 |