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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0030175 | filopodium | 5/50 | 106/19960 | 6.72982573832988e-06 | 0.00017978248758109 | 0.00010828441413553 | LCP1/MYO1G/TBC1D10C/TWF2/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D026362 | Serum Response Factor | 6/50 | 243/26076 | 6.94255891705418e-06 | 0.00032482486583921 | 0.00024383226311419 | ACTB/ILK/PFN1/RHOA/RPS6KA1/VASP | 6 |
| MeSH_gene2pubmed | B_10_12 | D020730 | Guanine Nucleotide Dissociation Inhibitors | 5/50 | 139/26076 | 6.99541563977184e-06 | 0.00032482486583921 | 0.00024383226311419 | ARHGDIB/CALM2/RAC2/RHOA/RHOG | 5 |
| MeSH_gene2pubmed | B_10_12 | D004910 | Erythrocyte Membrane | 6/50 | 251/26076 | 8.3514018925792e-06 | 0.00038060740847476 | 0.00028570585421981 | ACTB/CALM2/PFN1/PTPN6/RHOA/TPM3 | 6 |
| reactome | B_10_12 | R-HSA-114604 | GPVI-mediated activation cascade | 4/43 | 35/11146 | 9.2170274153987e-06 | 0.00023184368960272 | 0.0001746384141865 | PTPN6/RAC2/RHOA/RHOG | 4 |
| GO | B_10_12 | GO:0120034 | positive regulation of plasma membrane bounded cell projection assembly | 5/48 | 113/18986 | 9.53886938680224e-06 | 0.00051803398362172 | 0.00040202279480409 | ACTR3/ARPC2/PFN1/RAC2/TWF2 | 5 |
| GO | B_10_12 | GO:0098885 | modification of postsynaptic actin cytoskeleton | 3/48 | 17/18986 | 1.00591188141087e-05 | 0.00052605465798227 | 0.00040824727818663 | CAP1/PFN1/RHOA | 3 |
| WikiPathways | B_10_12 | WP306 | Focal adhesion | 7/35 | 199/8836 | 1.04139221364083e-05 | 0.00050514520173272 | 0.00042611383275218 | ACTB/ILK/MYL12A/PPP1CA/RAC2/RHOA/VASP | 7 |
| MeSH_gene2pubmed | B_10_12 | D001905 | Botulinum Toxins | 5/50 | 153/26076 | 1.11525898597782e-05 | 0.0004990277026348 | 0.00037459895127101 | ACTB/PTPN6/RAC2/RHOA/RHOG | 5 |
| WikiPathways | B_10_12 | WP524 | G13 signaling | 4/35 | 38/8836 | 1.38395945680198e-05 | 0.00050514520173272 | 0.00042611383275218 | ARHGDIB/CFL1/PFN1/RHOA | 4 |