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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_12 | D051347 | CapZ Actin Capping Protein | 4/50 | 47/26076 | 2.00719022661668e-06 | 0.00010654673599826 | 7.99801200525933e-05 | ACTB/ACTR3/CAPZB/CFL1 | 4 |
| MeSH_gene2pubmed | B_10_12 | D008246 | Lysophospholipids | 8/50 | 448/26076 | 2.03482185774831e-06 | 0.00010654673599826 | 7.99801200525933e-05 | ACTR3/CFL1/CSK/ILK/PFN1/PTPN6/RHOA/RPS6KA1 | 8 |
| KEGG | B_10_12 | hsa04144 | Endocytosis | 8/31 | 252/8541 | 2.25068697535456e-06 | 2.90088543490143e-05 | 2.02693446903276e-05 | ACTR3/ARPC1B/ARPC2/ARPC3/ARPC4/ARPC5/CAPZB/RHOA | 8 |
| GO | B_10_12 | GO:0097581 | lamellipodium organization | 5/48 | 91/18986 | 3.29435659225091e-06 | 0.00018606526033033 | 0.00014439685105403 | ACTR3/ARPC2/CAPZB/RAC2/TWF2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D016608 | Talin | 5/50 | 122/26076 | 3.6956990288116e-06 | 0.00018561459816133 | 0.00013933301386819 | ACTR3/ILK/LCP1/PTPN6/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D038981 | Receptors, Collagen | 5/50 | 122/26076 | 3.6956990288116e-06 | 0.00018561459816133 | 0.00013933301386819 | ACTB/CSK/ILK/PPP1CA/PTPN6 | 5 |
| MeSH_gene2pubmed | B_10_12 | D020846 | cdc42 GTP-Binding Protein, Saccharomyces cerevisiae | 4/50 | 55/26076 | 3.79491600663225e-06 | 0.00018678576584643 | 0.00014021215982399 | ACTR3/RAC2/RHOA/RHOG | 4 |
| GO | B_10_12 | GO:0035861 | site of double-strand break | 5/50 | 99/19960 | 4.8125726900556e-06 | 0.00014999184884006 | 9.03412768133244e-05 | ACTR3/ARPC2/ARPC3/ARPC4/ARPC5 | 5 |
| MeSH_gene2pubmed | B_10_12 | D052998 | Microcystins | 4/50 | 61/26076 | 5.75774546755353e-06 | 0.00027783944305194 | 0.0002085622971219 | ILK/PPP1CA/PTPN6/UCP2 | 4 |
| KEGG | B_10_12 | hsa04510 | Focal adhesion | 7/31 | 203/8541 | 6.2578227725922e-06 | 7.25907441620695e-05 | 5.07213003673263e-05 | ACTB/ILK/MYL12A/PPP1CA/RAC2/RHOA/VASP | 7 |