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Selected Module: B_10_12
Module Info
| Module_Name | B_10_12 |
| Cell_Type | B |
| Name | B_10_12: actin filament organization |
| Meta_Module | B_13 |
| Gene_Number | 50 |
Genes:
ACTB, ACTR3, ANXA6, ARHGDIB, ARL6IP5, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, BBLN, CALM2, CAP1, CAPZB, CD53, CFL1, CNN2, CORO1A, CSK, DUS2, FDFT1, HCLS1, ILK, LCP1, MTMR14, MYL12A, MYO1G, PDLIM1, PFN1, PPP1CA, PPP1R18, PRR13, PTPN6, RAC2, RGS19, RHOA, RHOG, RPS6KA1, SHKBP1, SYTL1, TADA3, TBC1D10C, TBCB, TMSB4X, TPM3, TRAPPC1, TSC22D4, TWF2, UCP2, VASP
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CAP1/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3 |
| SRF | 3.9374041695952e-11 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/LCP1/PFN1/TADA3/TPM3/VASP |
| SRF | 5.15518863810196e-08 | ACTR3/ANXA6/CAP1/CFL1/CNN2/PFN1 |
| SRF | 5.15654404051782e-08 | ACTB/ACTR3/ANXA6/ARPC4/CFL1/CNN2/PFN1/TADA3/TPM3 |
| ELK1 | 1.02349670677999e-07 | ARHGDIB/ARPC4/LCP1/PPP1CA/SYTL1/TADA3/TBC1D10C/TRAPPC1/VASP |
| SRF | 4.72727443461202e-07 | ACTB/ANXA6/ARPC4/CFL1/PFN1/TADA3/TPM3/VASP |
| ETS | 8.25848206285004e-07 | ACTR3/ARPC1B/CALM2/CAP1/CORO1A/HCLS1/LCP1/TBC1D10C |
| NERF | 1.64933095087325e-05 | ACTR3/ARHGDIB/CALM2/CAP1/CORO1A/HCLS1/PTPN6 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_12 | GO:0060491 | regulation of cell projection assembly | 7/48 | 207/18986 | 8.33989132741571e-07 | 5.60758407348142e-05 | 4.35179291821541e-05 | ACTR3/ARPC2/CAPZB/PFN1/RAC2/RHOG/TWF2 | 7 |
| GO | B_10_12 | GO:0003785 | actin monomer binding | 4/50 | 29/18737 | 1.0143456242988e-06 | 4.53919666873711e-05 | 3.06973017879899e-05 | CORO1A/PFN1/TMSB4X/TWF2 | 4 |
| GO | B_10_12 | GO:0030032 | lamellipodium assembly | 5/48 | 72/18986 | 1.02735918353841e-06 | 6.59377803252832e-05 | 5.11713354097359e-05 | ACTR3/ARPC2/CAPZB/RAC2/TWF2 | 5 |
| MeSH_gene2pubmed | B_10_12 | D051380 | GRB2 Adaptor Protein | 8/50 | 416/26076 | 1.1721527907661e-06 | 7.03577565384235e-05 | 5.28145865929269e-05 | ACTB/ACTR3/CSK/HCLS1/PTPN6/RAC2/RHOA/SHKBP1 | 8 |
| MeSH_gene2pubmed | B_10_12 | D018821 | CD18 Antigens | 7/50 | 287/26076 | 1.21178139400516e-06 | 7.10046193011121e-05 | 5.33001590596257e-05 | ACTR3/CD53/ILK/LCP1/RAC2/UCP2/VASP | 7 |
| MeSH_gene2pubmed | B_10_12 | D010588 | Phagosomes | 6/50 | 181/26076 | 1.26941466243724e-06 | 7.26518484711172e-05 | 5.453666420018e-05 | ACTB/ACTR3/CORO1A/PFN1/SYTL1/VASP | 6 |
| GO | B_10_12 | GO:0007163 | establishment or maintenance of cell polarity | 7/48 | 227/18986 | 1.54533759400507e-06 | 9.48702905537027e-05 | 7.36245508173583e-05 | ACTB/ACTR3/CAP1/ILK/PDLIM1/RHOA/RHOG | 7 |
| MeSH_gene2pubmed | B_10_12 | D014923 | Wiskott-Aldrich Syndrome | 5/50 | 105/26076 | 1.76416513337027e-06 | 9.86729634823687e-05 | 7.4069612657053e-05 | ACTB/ACTR3/PFN1/RHOA/VASP | 5 |
| MeSH_gene2pubmed | B_10_12 | D013481 | Superoxides | 8/50 | 442/26076 | 1.84105781291246e-06 | 0.00010068540616839 | 7.55802681090377e-05 | ACTB/ILK/PFN1/PTPN6/RAC2/RHOA/UCP2/VASP | 8 |
| GO | B_10_12 | GO:1902745 | positive regulation of lamellipodium organization | 4/48 | 36/18986 | 1.99564551569192e-06 | 0.00011741047783987 | 9.11169728875129e-05 | ACTR3/ARPC2/RAC2/TWF2 | 4 |