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Selected Module: B_10_11


Module Info

Module_Name B_10_11
Cell_Type B
Name B_10_11: Eukaryotic Initiation Factors
Meta_Module B_1
Gene_Number 41

Genes:

ABHD14B, APEX1, BTF3, C12orf57, CAMLG, CCNG1, CD48, COX4I1, EEF1D, EEF1G, EEF2, EIF3D, EIF3F, EIF4B, EPB41L4A-AS1, ESD, FAAP20, FAU, FXYD5, HSD17B11, PABPC1, PFDN5, PPDPF, RIC3, RPL15, RPL4, RPLP0, RPS2, RPS24, RPS3A, RSL1D1, SLC25A6, SMDT1, SMIM27, SNHG8, ST13, TOMM20, UXT, VPS51, ZFAS1, ZNF581


UMAP Visualizations


UMAP for B_10_11

UMAP for B_10_11


Word Cloud

Enriched TF

Wordcloud for B_10_11
TF p.adjust Genes
PSMB5 0.00080146689236252 EEF2/FAU/PABPC1/RPLP0/RPS2/ZFAS1
MYBL1 0.00080146689236252 COX4I1/FXYD5/PFDN5/RPL15/RPLP0/SMIM27/SNHG8
ZZZ3 0.00870215838282488 EIF3F/RPL15/RPS2/RPS3A/VPS51
RAX2 0.00900930942131189 EEF1G/RPL4/ZNF581
NPM1 0.00900930942131189 COX4I1/EEF2/PFDN5/RPS3A/SNHG8
SETBP1 0.00900930942131189 COX4I1/EEF1G/EIF3D/EIF4B
TBX1 0.016994876277699 EIF3F/PFDN5/RPS3A/ZFAS1
HOXA10 0.0235563762951255 EEF1G/EPB41L4A-AS1/FAU/RPL4


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_10_11 GO:0045182 translation regulator activity 7/36 438/18737 1.68818343707935e-05 0.00037421399521925 0.00027840218085168 EEF1D/EEF1G/EEF2/EIF3D/EIF3F/EIF4B/PABPC1 7
hallmark B_10_11 HALLMARK_MYC_TARGETS_V1 HALLMARK_MYC_TARGETS_V1 6/14 200/4384 1.84882189229217e-05 0.00022185862707506 0.00019461283076759 APEX1/EIF3D/PABPC1/RPLP0/RPS2/RSL1D1 6
reactome B_10_11 R-HSA-71291 Metabolism of amino acids and derivatives 7/30 367/11146 4.18909640990862e-05 0.00015185474485918 9.23254800868017e-05 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
MeSH_gene2pubmed B_10_11 D039562 Eukaryotic Initiation Factor-4F 3/39 45/26076 4.20219038091732e-05 0.00326930411635367 0.00279261353735347 BTF3/EIF4B/PABPC1 3
GO B_10_11 GO:0006413 translational initiation 4/37 127/18986 0.00010628526039926 0.0213101947100529 0.0185719507645034 EIF3D/EIF3F/EIF4B/RPS3A 4
reactome B_10_11 R-HSA-9692914 SARS-CoV-1-host interactions 4/30 96/11146 0.00011927535998979 0.00041927096238835 0.00025491065771343 FAU/RPS2/RPS24/RPS3A 4
MeSH_gene2pubmed B_10_11 D010454 Peptide Termination Factors 3/39 65/26076 0.00012670527767679 0.00924156619055117 0.00789407223420553 EIF3F/PABPC1/RPL4 3
GO B_10_11 GO:0003743 translation initiation factor activity 3/36 51/18737 0.00012731369735093 0.00241896024966768 0.00179962218811842 EIF3D/EIF3F/EIF4B 3
MeSH_gene2pubmed B_10_11 D019893 Ribosomal Protein S6 Kinases 5/39 341/26076 0.00014841972280984 0.0101885774422993 0.00870300170284351 EEF1D/EEF2/EIF3F/EIF4B/RPL4 5
MeSH_gene2pubmed B_10_11 D014637 Valine-tRNA Ligase 2/39 13/26076 0.00016825114073874 0.0109082822912283 0.00931776785260739 EEF1D/EEF1G 2